RNA–Protein interactions for RNA: ENST00000445368.1

PUDPP3-201, Transcript of pseudouridine 5'-phosphatase pseudogene 3, humanhuman

BASIC

Gene PUDPP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP3-201ENST00000445368 RFKQ969G6 155 aa13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 TMEM54Q969K7 222 aa13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 APH1AQ96BI3 265 aa13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 OTULINQ96BN8 352 aa13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 SYT4Q9H2B2 425 aa13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 SLC24A3Q9HC58 644 aa13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 B3GAT2Q9NPZ5 323 aa13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 RPRD1BQ9NQG5 326 aaKnown RBP13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 NPDC1Q9NQX5 325 aaPredicted RBP13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 ASB6Q9NWX5 421 aa13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 GLTPQ9NZD2 209 aa13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 H2AFY2Q9P0M6 372 aaPredicted RBP13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 FOXD3Q9UJU5 478 aaPredicted RBP13.12□□□□□ -0.31
PUDPP3-201ENST00000445368 SH3D21A4FU49 640 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 PRODHO43272 600 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 SPI1P17947 270 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 PEX19P40855 299 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 OR3A2P47893 321 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 SIRPAP78324 504 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 LGALS3BPQ08380 585 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 CDK5R2Q13319 367 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 NUFIP2Q7Z417 695 aaKnown RBP13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 ZGRF1Q86YA3 2104 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 GPR137CQ8N3F9 429 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 CNEP1R1Q8N9A8 125 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 POMGNT2Q8NAT1 580 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 CNIH3Q8TBE1 160 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 APH1BQ8WW43 257 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 PTP4A1Q93096 173 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 NMD3Q96D46 503 aaKnown RBP13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 C14orf79Q96F83 325 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 LRRC46Q96FV0 321 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 SFXN3Q9BWM7 321 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 LINC00470Q9BZP3 86 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 NUAK2Q9H093 628 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 SLCO5A1Q9H2Y9 848 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 MOKQ9UQ07 419 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 FKBP7Q9Y680 259 aa13.11□□□□□ -0.31
PUDPP3-201ENST00000445368 SLC22A31A6NKX4 558 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 SLC16A7O60669 478 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 ENTPD6O75354 484 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 WBP4O75554 376 aaKnown RBP13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 TNFSF13O75888 250 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 KRT33AO76009 404 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 BMP5P22003 454 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 KIR2DL2P43627 348 aaPredicted RBP13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 CENPAP49450 140 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 ZNF133P52736 654 aaPredicted RBP13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 CSNK2BP67870 215 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 FOXF2Q12947 444 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 SLC35D3Q5M8T2 416 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 MEX3BQ6ZN04 569 aaKnown RBP13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 ZBTB46Q86UZ6 589 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 ZNF295-AS1Q8N0V1 137 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 RELL2Q8NC24 303 aaPredicted RBP13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 OR9Q1Q8NGQ5 310 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 MCHR2Q969V1 340 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 ZNF582Q96NG8 517 aaPredicted RBP13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 HCAR1Q9BXC0 346 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 ULBP2Q9BZM5 246 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 C12orf49Q9H741 205 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 MED20Q9H944 212 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 SRA1Q9HD15 236 aaKnown RBP13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 DNAJC27Q9NZQ0 273 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 JKAMPQ9P055 326 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 ARHGAP21Q5T5U3 1957 aa13.1□□□□□ -0.31
PUDPP3-201ENST00000445368 DOCK7Q96N67 2140 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 ICE1Q9Y2F5 2266 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 IGLV1-36A0A0B4J1U3 117 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 KHDRBS3O75525 346 aaKnown RBP13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 CNOT4O95628 575 aaKnown RBP13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 QDPRP09417 244 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 PRF1P14222 555 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 CTLA4P16410 223 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 SLC2A5P22732 501 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 SSTR2P30874 369 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 HTR1FP30939 366 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 ASCL1P50553 236 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 BLVRAP53004 296 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 CDH11P55287 796 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 CXCR4P61073 352 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 FMODQ06828 376 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 TMED1Q13445 227 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 APOFQ13790 326 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 STK11Q15831 433 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 KLHL12Q53G59 568 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 C6orf141Q5SZD1 244 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 C10orf128Q5T292 105 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 TSPO2Q5TGU0 170 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 LCN1P1Q5VSP4 162 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 MEPCEQ7L2J0 689 aaKnown RBP13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 ABHD12BQ7Z5M8 362 aaPredicted RBP13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 BCDIN3DQ7Z5W3 292 aaKnown RBP13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 OR6V1Q8N148 313 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 PROKR2Q8NFJ6 384 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 BBS1Q8NFJ9 593 aa13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 RNASE6Q93091 150 aaKnown RBP13.09□□□□□ -0.31
PUDPP3-201ENST00000445368 TSSK2Q96PF2 358 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms