RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 SPATS1Q496A3 300 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 RRM2BQ7LG56 351 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 OAFQ86UD1 273 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 ZNF584Q8IVC4 421 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 ZNF525Q8N782 197 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 ANKS4BQ8N8V4 417 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 LRRC75AQ8NAA5 344 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 SYT14Q8NB59 555 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 OR4K5Q8NGD3 323 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 C10orf105Q8TEF2 133 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 HTRA1Q92743 480 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 DOK1Q99704 481 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 ALG12Q9BV10 488 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 SIAEQ9HAT2 523 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 NDE1Q9NXR1 346 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 NDUFAF4Q9P032 175 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 EGFL7Q9UHF1 273 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 TAGLN3Q9UI15 199 aa16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 FAM32AQ9Y421 112 aaKnown RBP16.27■□□□□ 0.2
ATPAF2-201ENST00000444058 A0A096LNT2 108 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 NDUFS8O00217 210 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 PTHP01270 115 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 RPS23P62266 143 aaKnown RBP16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 GALK2Q01415 458 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 LOXL1Q08397 574 aaPredicted RBP16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 SAMD4BQ5PRF9 694 aaKnown RBP16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 THEM4Q5T1C6 240 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 KRT80Q6KB66 452 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 TMEM53Q6P2H8 277 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 SLC16A14Q7RTX9 510 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 FGFBP3Q8TAT2 258 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 SLC7A13Q8TCU3 470 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 HDAC2Q92769 488 aaKnown RBP16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 C7orf34Q96L11 122 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 SORCS2Q96PQ0 1159 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 SH3GL3Q99963 347 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 RAB1BQ9H0U4 201 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 MAGEL2Q9UJ55 1249 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 TMEM5Q9Y2B1 443 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 CMAHPQ9Y471 501 aa16.26■□□□□ 0.19
ATPAF2-201ENST00000444058 TMEM129A0AVI4 362 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 A6NIZ1 184 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 hCG_2039718K7EN88 272 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 TLX2O43763 284 aaPredicted RBP16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 TP53P04637 393 aaPredicted RBP16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 H1F0P07305 194 aaKnown RBP16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 ERCC1P07992 297 aaPredicted RBP16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 CTXN1P60606 82 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 RAP1BP61224 184 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 RAP1AP62834 184 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 PPP2R2BQ00005 443 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 MYBPC1Q00872 1141 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 RAB39AQ14964 217 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 MAPK1IP1LQ8NDC0 245 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 OR51A7Q8NH64 312 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 MRPL24Q96A35 216 aaKnown RBP16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 RBP7Q96R05 134 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 TNFRSF13CQ96RJ3 184 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 VRK1Q99986 396 aaPredicted RBP16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 CD300AQ9UGN4 299 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 SLC7A8Q9UHI5 535 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 ZNF346Q9UL40 294 aaKnown RBP16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 UGT2A1Q9Y4X1 527 aa16.25■□□□□ 0.19
ATPAF2-201ENST00000444058 TRAV27A0A087WT01 109 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 SLC22A23A1A5C7 686 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 SNAP29O95721 258 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 PATE4P0C8F1 98 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 ITGA2P17301 1181 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 MNAT1P51948 309 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 CD47Q08722 323 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 FAM27BQ5VT28 67 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 SLC25A47Q6Q0C1 308 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 TBPL2Q6SJ96 375 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 C16orf89Q6UX73 402 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 SVOPLQ8N434 492 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 RNF148Q8N7C7 305 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 ARIH2OSQ8N7S6 290 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 RBM15BQ8NDT2 890 aaKnown RBP16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 SLC30A7Q8NEW0 376 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 ZNF519Q8TB69 540 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 NEU4Q8WWR8 484 aaPredicted RBP16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 DHRS1Q96LJ7 313 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 NDEL1Q9GZM8 345 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 KCNN2Q9H2S1 579 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 RNF121Q9H920 327 aa16.24■□□□□ 0.19
ATPAF2-201ENST00000444058 ABCA1O95477 2261 aa16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 LOC390937A0A1W2PQ73 354 aa16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 VWC2LB2RUY7 222 aa16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 CDC42EP2O14613 210 aa16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 AHCYL1O43865 530 aa16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 CD5LO43866 347 aa16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 SLC2A10O95528 541 aa16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 MMP7P09237 267 aaPredicted RBP16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 PDLIM4P50479 330 aa16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 PLP2Q04941 152 aa16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 TOP3AQ13472 1001 aaPredicted RBP16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 ZBED5Q49AG3 693 aa16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 GKAP1Q5VSY0 366 aaPredicted RBP16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 PODNL1Q6PEZ8 512 aa16.23■□□□□ 0.19
ATPAF2-201ENST00000444058 ZNF540Q8NDQ6 660 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms