RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 TGFBR3Q03167 851 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 KRR1Q13601 381 aaKnown RBP11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 KPNB1Q14974 876 aaKnown RBP11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 MSMPQ1L6U9 139 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 RFX4Q33E94 735 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 C1orf146Q5VVC0 180 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 DPY19L2P2Q6ZN68 376 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 RASSF6Q6ZTQ3 369 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 RRM2BQ7LG56 351 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 CDH24Q86UP0 819 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 KRTAP1-3Q8IUG1 177 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 CDK20Q8IZL9 346 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 GTPBP3Q969Y2 492 aaKnown RBP11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNF570Q96NI8 536 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 TSSK2Q96PF2 358 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 SH3GL3Q99963 347 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 ALG12Q9BV10 488 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 ARMC1Q9NVT9 282 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 VSX1Q9NZR4 365 aaPredicted RBP11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 ST6GALNAC2Q9UJ37 374 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 TMCC3Q9ULS5 477 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 RNF115Q9Y4L5 304 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 CDH10Q9Y6N8 788 aa11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 CHD3Q12873 2000 aaKnown RBP11.17□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNF469Q96JG9 3925 aaPredicted RBP11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 PRSS37A4D1T9 235 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 ARRDC5A6NEK1 342 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 E7EQL1 145 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 ATP6V1G2-DDX39BF2Z307 99 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 EBAG9O00559 213 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 SOCS2O14508 198 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 ARPC3O15145 178 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 ARHGEF9O43307 516 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 GPANK1O95872 356 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 DANCRP0C864 163 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 PSKH1P11801 424 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 CBR1P16152 277 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 HIST1H1CP16403 213 aaKnown RBP11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 RPL4P36578 427 aaKnown RBP11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 NR1H2P55055 460 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 CD47Q08722 323 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 ENDOGQ14249 297 aaKnown RBP11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 TESK1Q15569 626 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 PGGHGQ32M88 737 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNF672Q499Z4 452 aaPredicted RBP11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 UGT2A3Q6UWM9 527 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 CD300LDQ6UXZ3 194 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 SLC22A24Q8N4F4 322 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 GIPC3Q8TF64 312 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 ZNRF4Q8WWF5 429 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 NSMAFQ92636 917 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 AKAP1Q92667 903 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 POP5Q969H6 163 aaKnown RBP11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 MUCL1Q96DR8 90 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 FOXN4Q96NZ1 517 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 SLC38A2Q96QD8 506 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 FEVQ99581 238 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 FN3KQ9H479 309 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 UBTD1Q9HAC8 227 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 SMURF2Q9HAU4 748 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 OBP2BQ9NPH6 170 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 B3GAT2Q9NPZ5 323 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 IL20Q9NYY1 176 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 DNAJB9Q9UBS3 223 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 POFUT2Q9Y2G5 429 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 USF3Q68DE3 2245 aa11.16□□□□□ -0.62
PDLIM2-212ENST00000443561 IGLV1-36A0A0B4J1U3 117 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 HS3ST1O14792 307 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 CD8AP01732 235 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 SOD3P08294 240 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 GAAP10253 952 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 APEHP13798 732 aaKnown RBP11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 HOXB1P14653 301 aaPredicted RBP11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 IDH3GP51553 393 aaPredicted RBP11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 ACTR3P61158 418 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 MRPS34P82930 218 aaKnown RBP11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 NAAAQ02083 359 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 HGFACQ04756 655 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 ATP6AP1Q15904 470 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 CLEC12AQ5QGZ9 265 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 FAM205BPQ63HN1 556 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 AMIGO2Q86SJ2 522 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 FAM169BQ8N8A8 192 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 NPEPL1Q8NDH3 523 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 LRTOMTQ8WZ04 291 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 ERMAPQ96PL5 475 aaPredicted RBP11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 SYT4Q9H2B2 425 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 DENND2DQ9H6A0 471 aaPredicted RBP11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 PDP1Q9P0J1 537 aaPredicted RBP11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 MGAT4BQ9UQ53 548 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 VPS13CQ709C8 3753 aa11.15□□□□□ -0.62
PDLIM2-212ENST00000443561 IGHV2OR16-5A0A0B4J2B6 119 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 OR6C68A6NDL8 312 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 A6NIZ1 184 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 MPZL1O95297 269 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 STAMBPO95630 424 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 CD3EP07766 207 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 PTAFRP25105 342 aa11.14□□□□□ -0.63
PDLIM2-212ENST00000443561 SLC6A6P31641 620 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms