RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 SLC36A2Q495M3 483 aa18.21■□□□□ 0.51
CDKN3-204ENST00000442975 TMEM53Q6P2H8 277 aa18.21■□□□□ 0.51
CDKN3-204ENST00000442975 C16orf89Q6UX73 402 aa18.21■□□□□ 0.51
CDKN3-204ENST00000442975 TSEN54Q7Z6J9 526 aaKnown RBP18.21■□□□□ 0.51
CDKN3-204ENST00000442975 RNF113BQ8IZP6 322 aaKnown RBP18.21■□□□□ 0.51
CDKN3-204ENST00000442975 SLC7A13Q8TCU3 470 aa18.21■□□□□ 0.51
CDKN3-204ENST00000442975 FAM46AQ96IP4 442 aaKnown RBP18.21■□□□□ 0.51
CDKN3-204ENST00000442975 CDRT15Q96T59 188 aa18.21■□□□□ 0.51
CDKN3-204ENST00000442975 PLK3Q9H4B4 646 aa18.21■□□□□ 0.51
CDKN3-204ENST00000442975 ANKRD19PQ9H560 264 aa18.21■□□□□ 0.51
CDKN3-204ENST00000442975 DYNLRB1Q9NP97 96 aa18.21■□□□□ 0.51
CDKN3-204ENST00000442975 SPEF1Q9Y4P9 236 aa18.21■□□□□ 0.51
CDKN3-204ENST00000442975 TLN2Q9Y4G6 2542 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 DYNC1I1O14576 645 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 CDC42EP2O14613 210 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 ARPC2O15144 300 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 GPRIN2O60269 458 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 CDAP32320 146 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 RPL4P36578 427 aaKnown RBP18.2■□□□□ 0.5
CDKN3-204ENST00000442975 SLC9A3P48764 834 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 DSCR9P59020 149 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 RPL27P61353 136 aaKnown RBP18.2■□□□□ 0.5
CDKN3-204ENST00000442975 VLDLRP98155 873 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 KRT72Q14CN4 511 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 TAF11Q15544 211 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 C10orf128Q5T292 105 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 PODNL1Q6PEZ8 512 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 ZNF584Q8IVC4 421 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 DEFB107AQ8IZN7 70 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 LRRC18Q8N456 261 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 CLDN22Q8N7P3 220 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 FAM168AQ92567 244 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 NSMCE2Q96MF7 247 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 ZNF75AQ96N20 296 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 TSPAN32Q96QS1 320 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 TNFRSF13CQ96RJ3 184 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 NDEL1Q9GZM8 345 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 NDE1Q9NXR1 346 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 TMEM5Q9Y2B1 443 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 CMAHPQ9Y471 501 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 ALPK2Q86TB3 2170 aa18.2■□□□□ 0.5
CDKN3-204ENST00000442975 A0A1W2PRQ8 180 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 IGHMP01871 453 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 TP53P04637 393 aaPredicted RBP18.19■□□□□ 0.5
CDKN3-204ENST00000442975 SERPINA5P05154 406 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 HSD17B1P14061 328 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 RHCEP18577 417 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 NR4A1P22736 598 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 ERVK-25P63136 954 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 DGCR6Q14129 220 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 FAM205BPQ63HN1 556 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 CSPG4Q6UVK1 2322 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 SLC30A7Q8NEW0 376 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 OR52J3Q8NH60 311 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 CCT8L2Q96SF2 557 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 KCNK17Q96T54 332 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 ALG12Q9BV10 488 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 GORASP2Q9H8Y8 452 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 SMURF2Q9HAU4 748 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 ZNF346Q9UL40 294 aaKnown RBP18.19■□□□□ 0.5
CDKN3-204ENST00000442975 UGT2A1Q9Y4X1 527 aa18.19■□□□□ 0.5
CDKN3-204ENST00000442975 IGKV1D-43A0A0B4J1Z2 117 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 TRBV4-1A0A0J9YWV2 114 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 SH3PXD2BA1X283 911 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 A6NIZ1 184 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 INAFM1C9JVW0 142 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 H7C1C5 153 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 F12P00748 615 aaPredicted RBP18.18■□□□□ 0.5
CDKN3-204ENST00000442975 CSF3P09919 207 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 ZNF35P13682 527 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 PPOXP50336 477 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 RAP1BP61224 184 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 LCN6P62502 163 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 RAP1AP62834 184 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 PPP2R2BQ00005 443 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 SPIBQ01892 262 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 HSF2Q03933 536 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 SGCAQ16586 387 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 ANKDD1AQ495B1 522 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 NRN1LQ496H8 165 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 DPPA2Q7Z7J5 298 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 LRRC75AQ8NAA5 344 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 ZNF519Q8TB69 540 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 MCUR1Q96AQ8 359 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 NMD3Q96D46 503 aaKnown RBP18.18■□□□□ 0.5
CDKN3-204ENST00000442975 C7orf34Q96L11 122 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 KCNN2Q9H2S1 579 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 OR51B6Q9H340 312 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 CDH20Q9HBT6 801 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 CCNB1IP1Q9NPC3 277 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 FZR1Q9UM11 496 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 ADAM18Q9Y3Q7 739 aa18.18■□□□□ 0.5
CDKN3-204ENST00000442975 ERCC1P07992 297 aaPredicted RBP18.17■□□□□ 0.5
CDKN3-204ENST00000442975 CCL2P13500 99 aa18.17■□□□□ 0.5
CDKN3-204ENST00000442975 ITGA2P17301 1181 aa18.17■□□□□ 0.5
CDKN3-204ENST00000442975 ZNF133P52736 654 aaPredicted RBP18.17■□□□□ 0.5
CDKN3-204ENST00000442975 RPS23P62266 143 aaKnown RBP18.17■□□□□ 0.5
CDKN3-204ENST00000442975 MRPS34P82930 218 aaKnown RBP18.17■□□□□ 0.5
CDKN3-204ENST00000442975 PLP2Q04941 152 aa18.17■□□□□ 0.5
CDKN3-204ENST00000442975 KRTAP1-1Q07627 177 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms