RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 TMEM185BQ9H7F4 350 aa11.8□□□□□ -0.52
CPSF4-206ENST00000441580 MRPL22Q9NWU5 206 aaKnown RBP11.8□□□□□ -0.52
CPSF4-206ENST00000441580 QPCTLQ9NXS2 382 aa11.8□□□□□ -0.52
CPSF4-206ENST00000441580 ABRACLQ9P1F3 81 aa11.8□□□□□ -0.52
CPSF4-206ENST00000441580 KLHL9Q9P2J3 617 aa11.8□□□□□ -0.52
CPSF4-206ENST00000441580 B3GAT1Q9P2W7 334 aa11.8□□□□□ -0.52
CPSF4-206ENST00000441580 COMMD3Q9UBI1 195 aa11.8□□□□□ -0.52
CPSF4-206ENST00000441580 SDK2Q58EX2 2172 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 A0A0G2JK05 382 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 TRBV5-5A0A0J9YX44 114 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 SULT2B1O00204 365 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 ZNF593O00488 134 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-206ENST00000441580 CDK2AP1O14519 115 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 DVL2O14641 736 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 MAGEB3O15480 346 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 MAGEB4O15481 346 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-206ENST00000441580 EFNA2O43921 213 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 TMCC2O75069 709 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 AQP8O94778 261 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 RPP14O95059 124 aaKnown RBP11.79□□□□□ -0.52
CPSF4-206ENST00000441580 ZFPL1O95159 310 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 VAMP5O95183 116 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 HLA-DOBP13765 273 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 AZGP1P25311 298 aaKnown RBP11.79□□□□□ -0.52
CPSF4-206ENST00000441580 SFTPDP35247 375 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 P2RY4P51582 365 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 RIDAP52758 137 aaKnown RBP11.79□□□□□ -0.52
CPSF4-206ENST00000441580 BIDP55957 195 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 CLRN1P58418 232 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 NANOS3P60323 173 aaKnown RBP11.79□□□□□ -0.52
CPSF4-206ENST00000441580 SCN1BQ07699 218 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 Q0VFX4 171 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 EIF2B1Q14232 305 aaKnown RBP11.79□□□□□ -0.52
CPSF4-206ENST00000441580 SLC17A1Q14916 467 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 POU4F3Q15319 338 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 INPP5JQ15735 1006 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-206ENST00000441580 PCK2Q16822 640 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 ACER2Q5QJU3 275 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 FAM27D1Q5T7N8 215 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 BAIAP2L2Q6UXY1 529 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 TMPPEQ6ZT21 453 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 KRT77Q7Z794 578 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 OR8H2Q8N162 312 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 OR10H5Q8NGA6 315 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 OR2G2Q8NGZ5 317 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 OR6X1Q8NH79 312 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 RNF128Q8TEB7 428 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 THEM6Q8WUY1 208 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 KCNE4Q8WWG9 221 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 DERL3Q96Q80 235 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 RBP7Q96R05 134 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 UBL7Q96S82 380 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-206ENST00000441580 PDCD1LG2Q9BQ51 273 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 NAA11Q9BSU3 229 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-206ENST00000441580 PROK2Q9HC23 129 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 RABL2AQ9UBK7 228 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-206ENST00000441580 RABL2BQ9UNT1 228 aa11.79□□□□□ -0.52
CPSF4-206ENST00000441580 PCNX3Q9H6A9 2034 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 A0A1W2PNR3 127 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 A0A1W2PNU3 283 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-206ENST00000441580 FAM25AB3EWG3 89 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 FAM25CB3EWG5 89 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 FAM25GB3EWG6 89 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 TLX3O43711 291 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-206ENST00000441580 HPGDSO60760 199 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 RAF1P04049 648 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 IL7P13232 177 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 ZNF43P17038 809 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 TCEA1P23193 301 aaKnown RBP11.78□□□□□ -0.52
CPSF4-206ENST00000441580 APEX1P27695 318 aaKnown RBP11.78□□□□□ -0.52
CPSF4-206ENST00000441580 THBS2P35442 1172 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 CYB561P49447 251 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 BCAP31P51572 246 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 CLDN6P56747 220 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 TRIP6Q15654 476 aaKnown RBP11.78□□□□□ -0.52
CPSF4-206ENST00000441580 MEP1BQ16820 701 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 TMEM176BQ3YBM2 270 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-206ENST00000441580 PYDC2Q56P42 97 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 THEM4Q5T1C6 240 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 AGAP7PQ5VUJ5 663 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 TRIQKQ629K1 86 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 DEGS2Q6QHC5 323 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 MDGA2Q7Z553 956 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 GLB1L2Q8IW92 636 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 BEST3Q8N1M1 668 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 ZNF676Q8N7Q3 588 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 GPR148Q8TDV2 347 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 RGP1Q92546 391 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-206ENST00000441580 PNPLA2Q96AD5 504 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 SLC25A44Q96H78 314 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-206ENST00000441580 JSRP1Q96MG2 331 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-206ENST00000441580 CMTM3Q96MX0 182 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 MED29Q9NX70 200 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 ETAA1Q9NY74 926 aa11.78□□□□□ -0.52
CPSF4-206ENST00000441580 BOKQ9UMX3 212 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-206ENST00000441580 COA3Q9Y2R0 106 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-206ENST00000441580 FUOMA2VDF0 154 aa11.77□□□□□ -0.53
CPSF4-206ENST00000441580 OR2M5A3KFT3 312 aa11.77□□□□□ -0.53
CPSF4-206ENST00000441580 OR4C45A6NMZ5 311 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms