RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TP53I11O14683 189 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 HPGDSO60760 199 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 TPPPO94811 219 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 AGFG2O95081 481 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 RAF1P04049 648 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 KLK3P07288 261 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-209ENST00000440653 CSF3P09919 207 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 SFTPCP11686 197 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 NR2C1P13056 603 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 NPR2P20594 1047 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 APEX1P27695 318 aaKnown RBP8.23□□□□□ -1.09
HDAC6-209ENST00000440653 GRPRP30550 384 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 CASRP41180 1078 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 CDKN2AP42771 156 aaKnown RBP8.23□□□□□ -1.09
HDAC6-209ENST00000440653 INPP1P49441 399 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 E2F1Q01094 437 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 PUDPQ08623 228 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 ZP4Q12836 540 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 SNTA1Q13424 505 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 NTRK2Q16620 822 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 ZNF684Q5T5D7 378 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 IDNKQ5T6J7 187 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 AGAP6Q5VW22 663 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 C1QL3Q5VWW1 255 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 PYHIN1Q6K0P9 492 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 C3orf33Q6P1S2 294 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 FDX2Q6P4F2 183 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 LRRN1Q6UXK5 716 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 CDH24Q86UP0 819 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 RAB43Q86YS6 212 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 Q8N402 240 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 TRMT10AQ8TBZ6 339 aaKnown RBP8.23□□□□□ -1.09
HDAC6-209ENST00000440653 ZPLD1Q8TCW7 415 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 C15orf40Q8WUR7 153 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 SPACA9Q96E40 222 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-209ENST00000440653 AGAP4Q96P64 663 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 CTRCQ99895 268 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 WDR77Q9BQA1 342 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-209ENST00000440653 POTEKPQ9BYX7 375 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 CYSLTR2Q9NS75 346 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 C14orf119Q9NWQ9 140 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 COPS3Q9UNS2 423 aa8.23□□□□□ -1.09
HDAC6-209ENST00000440653 SIRT4Q9Y6E7 314 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-209ENST00000440653 MED13LQ71F56 2210 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 A0A087WZY1 265 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 A0A0G2JK05 382 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 SHISA3A0PJX4 238 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 TTLL8A6PVC2 850 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 B4E171 279 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 FTCDNL1E5RQL4 147 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 E9PI62 339 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 ADAM10O14672 748 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 ZNF254O75437 659 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 TIAF1O95411 115 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 ABHD16AO95870 558 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 F13BP05160 661 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 CFPP27918 469 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 ADH6P28332 368 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 THBS2P35442 1172 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 ACVR1BP36896 505 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 EIF1P41567 113 aaKnown RBP8.22□□□□□ -1.09
HDAC6-209ENST00000440653 TSPAN7P41732 249 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 MAP2K3P46734 347 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 UQCRFS1P47985 274 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 CCR9P51686 369 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 PITPNAQ00169 270 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 GLO1Q04760 184 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 LTBQ06643 244 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 SELENBP1Q13228 472 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 ACKR1Q16570 336 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 Q499Y3 187 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 UBE2NLQ5JXB2 153 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 CDCP2Q5VXM1 449 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 KCTD18Q6PI47 426 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-209ENST00000440653 FAM198BQ6UWH4 519 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 UNQ9370/PRO34162Q6UXP9 181 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 GDPD3Q7L5L3 318 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 ADGRG3Q86Y34 549 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 RFLNBQ8N5W9 214 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 BMPERQ8N8U9 685 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 SLC38A9Q8NBW4 561 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 OR51L1Q8NGJ5 315 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 OR6N2Q8NGY6 317 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 OTOSQ8NHW6 89 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 ZNF417Q8TAU3 575 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 ZNF587Q96SQ5 575 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-209ENST00000440653 KCNJ15Q99712 375 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 C7orf50Q9BRJ6 194 aaKnown RBP8.22□□□□□ -1.09
HDAC6-209ENST00000440653 ZPBPQ9BS86 351 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 RTN4RQ9BZR6 473 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 SYT4Q9H2B2 425 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 PPP1R3EQ9H7J1 279 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 METTL7AQ9H8H3 244 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 CHST11Q9NPF2 352 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 SERINC1Q9NRX5 453 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 MYOTQ9UBF9 498 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 EXTL2Q9UBQ6 330 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 B3GALT5Q9Y2C3 310 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 B3GALT1Q9Y5Z6 326 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 ETV7Q9Y603 341 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms