RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 PDP1Q9P0J1 537 aaPredicted RBP16.99■□□□□ 0.31
SEMA3B-206ENST00000439487 ABCD4O14678 606 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 HLA-HP01893 362 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 SPOCK1Q08629 439 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 THEM4Q5T1C6 240 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 GPR139Q6DWJ6 353 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 ADAM5Q6NVV9 412 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 RASSF6Q6ZTQ3 369 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 CDH24Q86UP0 819 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 SKA3Q8IX90 412 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 SLC22A24Q8N4F4 322 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 KBTBD8Q8NFY9 601 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 DUS3LQ96G46 650 aaKnown RBP16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 FEVQ99581 238 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 NIPSNAP1Q9BPW8 284 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 NTN4Q9HB63 628 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 AP4S1Q9Y587 144 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 CDH10Q9Y6N8 788 aa16.98■□□□□ 0.31
SEMA3B-206ENST00000439487 IGHV1-18A0A0C4DH31 117 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 SLC22A23A1A5C7 686 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 IMPA2O14732 288 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 DEAF1O75398 565 aaPredicted RBP16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 TXNDC12O95881 172 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 IGFBP1P08833 259 aaPredicted RBP16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 CD79AP11912 226 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 NR2C1P13056 603 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 PTAFRP25105 342 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 CDAP32320 146 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 PIGFQ07326 219 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 CLEC12AQ5QGZ9 265 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 PTCHD4Q6ZW05 846 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 MDP1Q86V88 176 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 CCDC36Q8IYA8 594 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 PIAS4Q8N2W9 510 aaPredicted RBP16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 LILRB1Q8NHL6 650 aaPredicted RBP16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 FGFBP3Q8TAT2 258 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 FNDC8Q8TC99 324 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 AKAP1Q92667 903 aaKnown RBP eCLIP16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 SH3GL3Q99963 347 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 PLA2G12AQ9BZM1 189 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 SMURF2Q9HAU4 748 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 NOX3Q9HBY0 568 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 ARMC1Q9NVT9 282 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 B3GNT2Q9NY97 397 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 ZNF224Q9NZL3 707 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 CRNNQ9UBG3 495 aaPredicted RBP16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 PLEKHA6Q9Y2H5 1048 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 UGT2A1Q9Y4X1 527 aa16.97■□□□□ 0.31
SEMA3B-206ENST00000439487 PRSS37A4D1T9 235 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 SHISA9B4DS77 424 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 CELA3BP08861 270 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 PATE4P0C8F1 98 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 OR8G3PP0DMU2 310 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 APEHP13798 732 aaKnown RBP16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 CBR1P16152 277 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 GSTM3P21266 225 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 PRKACGP22612 351 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 CDKN2AP42771 156 aaKnown RBP16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 KPNB1Q14974 876 aaKnown RBP16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 OR52L1Q8NGH7 329 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 OR8D4Q8NGM9 314 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 SLC38A2Q96QD8 506 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 SEC61A2Q9H9S3 476 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 IL20Q9NYY1 176 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 ST6GALNAC2Q9UJ37 374 aa16.96■□□□□ 0.31
SEMA3B-206ENST00000439487 USF3Q68DE3 2245 aa16.96■□□□□ 0.3
SEMA3B-206ENST00000439487 ARRDC5A6NEK1 342 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 ARPC3O15145 178 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 AHCYL1O43865 530 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 FARS2O95363 451 aaKnown RBP16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 SOX14O95416 240 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 TP53P04637 393 aaPredicted RBP16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 PAX7P23759 505 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 IDH3GP51553 393 aaPredicted RBP16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 ACTR3P61158 418 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 NPRL3Q12980 569 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 ATP6AP1Q15904 470 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 ETFDHQ16134 617 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 SGCAQ16586 387 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 GSG1Q2KHT4 349 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 SLC35F1Q5T1Q4 408 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 RPL13AP3Q6NVV1 102 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 PAMR1Q6UXH9 720 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 AMIGO2Q86SJ2 522 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 MYPOPQ86VE0 399 aaPredicted RBP16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 LRRC18Q8N456 261 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 NANOS1Q8WY41 292 aaKnown RBP16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 DENND2DQ9H6A0 471 aaPredicted RBP16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 TBC1D23Q9NUY8 699 aa16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 VSX1Q9NZR4 365 aaPredicted RBP16.95■□□□□ 0.3
SEMA3B-206ENST00000439487 A0A1W2PPL8 197 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 HS3ST1O14792 307 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 UBL3O95164 117 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 IGKV3-15P01624 115 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 IGLV1-44P01699 117 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 CECR9P0C854 216 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 HIST1H1CP16403 213 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 FASP25445 335 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 NOS3P29474 1203 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 ARR3P36575 388 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms