RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 FNDC8Q8TC99 324 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 IPCEF1Q8WWN9 437 aaPredicted RBP8.58□□□□□ -1.04
CUBN-204ENST00000438254 MCHR2Q969V1 340 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 INTS12Q96CB8 462 aaKnown RBP8.58□□□□□ -1.04
CUBN-204ENST00000438254 JAM3Q9BX67 310 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 LINC00470Q9BZP3 86 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 OR51V1Q9H2C8 321 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 ADGRL4Q9HBW9 690 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 GLRX2Q9NS18 164 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 SCN3BQ9NY72 215 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 GLTPQ9NZD2 209 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 BLOC1S6Q9UL45 172 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 MOKQ9UQ07 419 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 TPRKBQ9Y3C4 175 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 PCDHGB1Q9Y5G3 927 aa8.58□□□□□ -1.04
CUBN-204ENST00000438254 SHANK1Q9Y566 2161 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 EFCAB10A6NFE3 127 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 SNTNA6NMZ2 147 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 AKAP8O43823 692 aaKnown RBP8.57□□□□□ -1.04
CUBN-204ENST00000438254 SLC16A7O60669 478 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 FAM20BO75063 409 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 TOXO94900 526 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 TFP02787 698 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 CDK1P06493 297 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 HOXD4P09016 255 aaPredicted RBP8.57□□□□□ -1.04
CUBN-204ENST00000438254 SBK2P0C263 348 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 PSKH1P11801 424 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 PCMT1P22061 227 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 PYCR1P32322 319 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 PIGFQ07326 219 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 LGALS3BPQ08380 585 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 RAB40BQ12829 278 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 PCK2Q16822 640 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 RIPPLY2Q5TAB7 128 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 GTF2IRD2BQ6EKJ0 949 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 ZNF773Q6PK81 442 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 RPTNQ6XPR3 784 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 AHSA2Q719I0 299 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 CHMP1BQ7LBR1 199 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 AAED1Q7RTV5 226 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 PRSS48Q7RTY5 328 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 GTF2IRD2Q86UP8 949 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 CD163Q86VB7 1156 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 DOLPP1Q86YN1 238 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 SYT14Q8NB59 555 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 ZNF540Q8NDQ6 660 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 OR51L1Q8NGJ5 315 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 OR52I1Q8NGK6 324 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 RNFT2Q96EX2 444 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 GMPPAQ96IJ6 420 aaPredicted RBP8.57□□□□□ -1.04
CUBN-204ENST00000438254 TRIB1Q96RU8 372 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 COPS4Q9BT78 406 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 CDCA4Q9BXL8 241 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 SRA1Q9HD15 236 aaKnown RBP8.57□□□□□ -1.04
CUBN-204ENST00000438254 CCNB1IP1Q9NPC3 277 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 MRPL22Q9NWU5 206 aaKnown RBP8.57□□□□□ -1.04
CUBN-204ENST00000438254 EMC3Q9P0I2 261 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 ERVK-18Q9QC07 812 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 DIMT1Q9UNQ2 313 aaKnown RBP8.57□□□□□ -1.04
CUBN-204ENST00000438254 UGT2A1Q9Y4X1 527 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 PRRC2CQ9Y520 2896 aaKnown RBP8.57□□□□□ -1.04
CUBN-204ENST00000438254 ATRXP46100 2492 aa8.57□□□□□ -1.04
CUBN-204ENST00000438254 GTF3C1Q12789 2109 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 MED12LQ86YW9 2145 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 ZNF726A6NNF4 738 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 PTGES3LE9PB15 166 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 RPL36A-HNRNPH2H7BZ11 118 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 KHDRBS3O75525 346 aaKnown RBP8.56□□□□□ -1.04
CUBN-204ENST00000438254 UPK3AO75631 287 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 GPANK1O95872 356 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 MT-ND2P03891 347 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 SCG5P05408 212 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 TPOP07202 933 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 STSP08842 583 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 QDPRP09417 244 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 CRABP1P29762 137 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 C21orf33P30042 268 aaPredicted RBP8.56□□□□□ -1.04
CUBN-204ENST00000438254 CEACAM8P31997 349 aaPredicted RBP8.56□□□□□ -1.04
CUBN-204ENST00000438254 TIMP3P35625 211 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 KIR2DL2P43627 348 aaPredicted RBP8.56□□□□□ -1.04
CUBN-204ENST00000438254 CSNK1A1P48729 337 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 CENPAP49450 140 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 CLRN1P58418 232 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 TUBA4AP68366 448 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 ST3GAL4Q11206 333 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 DOC2BQ14184 412 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 SF3B4Q15427 424 aaKnown RBP eCLIP8.56□□□□□ -1.04
CUBN-204ENST00000438254 STK11Q15831 433 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 KCNMB1Q16558 191 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 KLHL12Q53G59 568 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 C1orf185Q5T7R7 199 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 TSPO2Q5TGU0 170 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 CARD17Q5XLA6 110 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 XAF1Q6GPH4 301 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 ZNF585AQ6P3V2 769 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 GFRALQ6UXV0 394 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 NUFIP2Q7Z417 695 aaKnown RBP8.56□□□□□ -1.04
CUBN-204ENST00000438254 SPARTQ8N0X7 666 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 RPRMLQ8N4K4 120 aa8.56□□□□□ -1.04
CUBN-204ENST00000438254 POMGNT2Q8NAT1 580 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms