RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 CRHBPP24387 322 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 PPP2R1BP30154 601 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 GABRA4P48169 554 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 PITPNBP48739 271 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 XKP51811 444 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 CRISP3P54108 245 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 VSX2P58304 361 aaPredicted RBP5.58□□□□□ -1.52
SPEN-202ENST00000438066 GABARAPL2P60520 117 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 RPS18P62269 152 aaKnown RBP5.58□□□□□ -1.52
SPEN-202ENST00000438066 PMP22Q01453 160 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 SPIBQ01892 262 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 SRSF1Q07955 248 aaKnown RBP eCLIP5.58□□□□□ -1.526e-6■■□□□ 12.1
SPEN-202ENST00000438066 MYBPHQ13203 477 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 RAPSNQ13702 412 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 GNA13Q14344 377 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 GK2Q14410 553 aaPredicted RBP5.58□□□□□ -1.52
SPEN-202ENST00000438066 RBMS2Q15434 407 aaKnown RBP5.58□□□□□ -1.52
SPEN-202ENST00000438066 MICAQ29983 383 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 EXOC3L2Q2M3D2 409 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 DEFB110Q30KQ9 67 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 RBM48Q5RL73 367 aaKnown RBP5.58□□□□□ -1.52
SPEN-202ENST00000438066 FHL5Q5TD97 284 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 LYSMD4Q5XG99 296 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 ZNF770Q6IQ21 691 aaPredicted RBP5.58□□□□□ -1.52
SPEN-202ENST00000438066 PIP4P1Q86T03 277 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 CCDC71Q8IV32 467 aaPredicted RBP5.58□□□□□ -1.52
SPEN-202ENST00000438066 CDK20Q8IZL9 346 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 DNAJC22Q8N4W6 341 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 SLC24A4Q8NFF2 622 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 OR7G2Q8NG99 324 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 OR4K14Q8NGD5 310 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 OR5T3Q8NGG3 340 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 SAP25Q8TEE9 199 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 GIPC3Q8TF64 312 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 RASSF5Q8WWW0 418 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 ZNF354BQ96LW1 612 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 COL21A1Q96P44 957 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 MS4A4EQ96PG1 132 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 OR7D2Q96RA2 312 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 SEMA4CQ9C0C4 833 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 CHRNA10Q9GZZ6 450 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 ING2Q9H160 280 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 SLC38A1Q9H2H9 487 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 ANKRA2Q9H9E1 313 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 C3orf14Q9HBI5 128 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 DCAF16Q9NXF7 216 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 PTGFRNQ9P2B2 879 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 THEGQ9P2T0 379 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 SH3GLB1Q9Y371 365 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 HSPE1-MOB4S4R3N1 261 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 UNC13CQ8NB66 2214 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 COL5A1P20908 1838 aaPredicted RBP5.58□□□□□ -1.52
SPEN-202ENST00000438066 FRYLO94915 3013 aa5.58□□□□□ -1.52
SPEN-202ENST00000438066 VPS13AQ96RL7 3174 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 A0A0G2JPF8 293 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 TLCD2A6NGC4 264 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 C17orf105B2RV13 164 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 HNRNPCL2B2RXH8 293 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 HNRNPCL3B7ZW38 293 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 SLC1A7O00341 560 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 TNFRSF13BO14836 293 aaPredicted RBP5.57□□□□□ -1.52
SPEN-202ENST00000438066 CASC3O15234 703 aaKnown RBP5.57□□□□□ -1.52
SPEN-202ENST00000438066 B4GAT1O43505 415 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 FGF17O60258 216 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 LDB3O75112 727 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 SCGB2A1O75556 95 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 SERPINB7O75635 380 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 CPNE6O95741 557 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 DCNP07585 359 aaKnown RBP5.57□□□□□ -1.52
SPEN-202ENST00000438066 HTR1AP08908 422 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 CCDC159P0C7I6 412 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 HNRNPCL4P0DMR1 293 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 CDH3P22223 829 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 ELAVL4P26378 380 aaKnown RBP5.57□□□□□ -1.52
SPEN-202ENST00000438066 HOXA6P31267 233 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 YAP1P46937 504 aaKnown RBP5.57□□□□□ -1.52
SPEN-202ENST00000438066 CXCL12P48061 93 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 CSNK1EP49674 416 aaKnown RBP5.57□□□□□ -1.52
SPEN-202ENST00000438066 ZNF155Q12901 538 aaPredicted RBP5.57□□□□□ -1.52
SPEN-202ENST00000438066 TRIP6Q15654 476 aaKnown RBP5.57□□□□□ -1.52
SPEN-202ENST00000438066 DEFB133Q30KQ1 61 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 CNPY1Q3B7I2 92 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 MAJINQ3KP22 176 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 C14orf28Q4W4Y0 310 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 ZNF773Q6PK81 442 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 PLEKHM3Q6ZWE6 761 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 CA13Q8N1Q1 262 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 PARP8Q8N3A8 854 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 TTC29Q8NA56 475 aaPredicted RBP5.57□□□□□ -1.52
SPEN-202ENST00000438066 OR10G2Q8NGC3 310 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 OR4D11Q8NGI4 311 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 ZNF675Q8TD23 568 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 GGHQ92820 318 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 DGCR14Q96DF8 476 aaKnown RBP5.57□□□□□ -1.52
SPEN-202ENST00000438066 MAGED4Q96JG8 741 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 TRNT1Q96Q11 434 aaKnown RBP5.57□□□□□ -1.52
SPEN-202ENST00000438066 OR1F2PQ96R84 312 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 TXN2Q99757 166 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 MAP3K3Q99759 626 aa5.57□□□□□ -1.52
SPEN-202ENST00000438066 WFDC6Q9BQY6 131 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms