RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 OR2T11Q8NH01 316 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 OR2A14Q96R47 310 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 SLC22A12Q96S37 553 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 UFSP2Q9NUQ7 469 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 PTPRZ1P23471 2315 aaPredicted RBP10.32□□□□□ -0.76
SCN4A-201ENST00000435607 SMAD6O43541 496 aaKnown RBP10.32□□□□□ -0.76
SCN4A-201ENST00000435607 MT-ND4LP03901 98 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 C18orf21Q32NC0 220 aaPredicted RBP10.32□□□□□ -0.76
SCN4A-201ENST00000435607 CDH26Q8IXH8 852 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 ZNF480Q8WV37 535 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 INSM2Q96T92 566 aaPredicted RBP10.32□□□□□ -0.76
SCN4A-201ENST00000435607 MACROD1Q9BQ69 325 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 ESRP2Q9H6T0 727 aaKnown RBP10.32□□□□□ -0.76
SCN4A-201ENST00000435607 LOXL2Q9Y4K0 774 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 H7BYZ3 331 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 ELK1P19419 428 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 PCMT1P22061 227 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 AOAHP28039 575 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 PGGT1BP53609 377 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 BHLHE23Q8NDY6 225 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 OR13C8Q8NGS7 320 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 SUCNR1Q9BXA5 334 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 ARRDC1-AS1Q9H2J1 176 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 AAMDCQ9H7C9 122 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 SLC35D1Q9NTN3 355 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 ACOXLQ9NUZ1 547 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 CROCCQ5TZA2 2017 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 MAP2K6P52564 334 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 OPCMLQ14982 345 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 SUMF1Q8NBK3 374 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 EDARADDQ8WWZ3 215 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 PCYT2Q99447 389 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 SORBS1Q9BX66 1292 aaKnown RBP10.32□□□□□ -0.76
SCN4A-201ENST00000435607 STMND1H3BQB6 276 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 SLC36A1Q7Z2H8 476 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 UTP4Q969X6 686 aaKnown RBP10.32□□□□□ -0.76
SCN4A-201ENST00000435607 TXLNGYQ9BZA5 131 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 AMBRA1Q9C0C7 1298 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 PLK3Q9H4B4 646 aa10.32□□□□□ -0.76
SCN4A-201ENST00000435607 GAR1Q9NY12 217 aaKnown RBP10.32□□□□□ -0.76
SCN4A-201ENST00000435607 AJAP1Q9UKB5 411 aaPredicted RBP10.32□□□□□ -0.76
SCN4A-201ENST00000435607 APEX1P27695 318 aaKnown RBP10.31□□□□□ -0.76
SCN4A-201ENST00000435607 TSPAN31Q12999 210 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 RGS7BPQ6MZT1 257 aaPredicted RBP10.31□□□□□ -0.76
SCN4A-201ENST00000435607 LHFPL2Q6ZUX7 228 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 IGDCC3Q8IVU1 814 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 TUSC5Q8IXB3 177 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 ADGRF3Q8IZF5 1079 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 ARPC5LQ9BPX5 153 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 LIN7CQ9NUP9 197 aaKnown RBP10.31□□□□□ -0.76
SCN4A-201ENST00000435607 DRGXA6NNA5 263 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 ETV4P43268 484 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 IHHQ14623 411 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 FCRLAQ7L513 359 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 KMT5CQ86Y97 462 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 TMEM72A0PK05 275 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 NDUFB3O43676 98 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 CAPNS1P04632 268 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 PCK2Q16822 640 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 RAB6CQ53S08 254 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 DOK3Q7L591 496 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 TTC9BQ8N6N2 239 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 SEC22CQ9BRL7 303 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 TMEM181Q9P2C4 612 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 DBX1A6NMT0 343 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 TNFRSF10CO14798 259 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 SDC1P18827 310 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 MDGA2Q7Z553 956 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 DEFB108BQ8NET1 73 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 PRSS16Q9NQE7 514 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 DCAF13Q9NV06 445 aaKnown RBP10.31□□□□□ -0.76
SCN4A-201ENST00000435607 TERTO14746 1132 aaKnown RBP10.31□□□□□ -0.76
SCN4A-201ENST00000435607 SMIM21Q3B7S5 101 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 TMEM217Q8N7C4 229 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 OR13C2Q8NGS9 318 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 FYTTD1Q96QD9 318 aaKnown RBP10.31□□□□□ -0.76
SCN4A-201ENST00000435607 MOB1AQ9H8S9 216 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 ARHGAP33O14559 1287 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 RBP2P50120 134 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 SEMA3BQ13214 749 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 WDR31Q8NA23 367 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 OR5D18Q8NGL1 313 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 RAB1BQ9H0U4 201 aa10.31□□□□□ -0.76
SCN4A-201ENST00000435607 CXXC1Q9P0U4 656 aaPredicted RBP10.31□□□□□ -0.76
SCN4A-201ENST00000435607 CCDC187A0A096LP49 1063 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 TRGV10A0A0A0MS01 117 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.3□□□□□ -0.76
SCN4A-201ENST00000435607 ZFP92A6NM28 416 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 PTGESO14684 152 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 GPR37O15354 613 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 OR8G3PP0DMU2 310 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 CNR1P21554 472 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 DESI1Q6ICB0 168 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 ENTHD1Q8IYW4 607 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 ITPKCQ96DU7 683 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 OR2M2Q96R28 347 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 CSF3RQ99062 836 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 OR2J3O76001 311 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 THBS1P07996 1170 aa10.3□□□□□ -0.76
SCN4A-201ENST00000435607 GLULP15104 373 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms