RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 ROPN1BQ9BZX4 212 aaPredicted RBP1.34□□□□□ -2.19
CDC40-204ENST00000431461 CDC42EP4Q9H3Q1 356 aaKnown RBP1.34□□□□□ -2.19
CDC40-204ENST00000431461 RNF167Q9H6Y7 350 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 PATZ1Q9HBE1 687 aaKnown RBP1.34□□□□□ -2.19
CDC40-204ENST00000431461 DDX19AQ9NUU7 478 aaKnown RBP1.34□□□□□ -2.19
CDC40-204ENST00000431461 KLHL28Q9NXS3 571 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 RBAKQ9NYW8 714 aaPredicted RBP1.34□□□□□ -2.19
CDC40-204ENST00000431461 CTSFQ9UBX1 484 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 ZNF223Q9UK11 482 aaPredicted RBP1.34□□□□□ -2.19
CDC40-204ENST00000431461 TMED5Q9Y3A6 229 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 GOLT1BQ9Y3E0 138 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 KCNE3Q9Y6H6 103 aa1.34□□□□□ -2.19
CDC40-204ENST00000431461 NFASCO94856 1347 aa1.34□□□□□ -2.2
CDC40-204ENST00000431461 MAP3K15Q6ZN16 1313 aa1.34□□□□□ -2.2
CDC40-204ENST00000431461 MSH6P52701 1360 aa1.34□□□□□ -2.2
CDC40-204ENST00000431461 MTCL1Q9Y4B5 1905 aaKnown RBP1.33□□□□□ -2.2
CDC40-204ENST00000431461 IGHV5-51A0A0C4DH38 117 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 A0A1B0GVI7 797 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 LYRM9A8MSI8 78 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 NDUFAB1O14561 156 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 GOSR2O14653 212 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 MRPS12O15235 138 aaKnown RBP1.33□□□□□ -2.2
CDC40-204ENST00000431461 DFNA5O60443 496 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 ZNF324O75467 553 aaPredicted RBP1.33□□□□□ -2.2
CDC40-204ENST00000431461 TNFSF13O75888 250 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 MOSP00540 346 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 AGTP01019 485 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 IGHV1-8P0DP01 117 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 ZNF24P17028 368 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 ZNF30P17039 623 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 CHMLP26374 656 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 GSSP48637 474 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 ZNF136P52737 540 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 ACLYP53396 1101 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 FGF8P55075 233 aaPredicted RBP1.33□□□□□ -2.2
CDC40-204ENST00000431461 UBE2HP62256 183 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 RPS21P63220 83 aaKnown RBP1.33□□□□□ -2.2
CDC40-204ENST00000431461 SLC7A9P82251 487 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 ECH1Q13011 328 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 IDI1Q13907 227 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 FZD2Q14332 565 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 DEFB116Q30KQ4 102 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 CHRFAM7AQ494W8 412 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 RAET1LQ5VY80 246 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 LCN12Q6JVE5 192 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 TTC23LQ6PF05 361 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 ZNF493Q6ZR52 646 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 CDR2LQ86X02 465 aaPredicted RBP1.33□□□□□ -2.2
CDC40-204ENST00000431461 C12orf56Q8IXR9 622 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 LYPD1Q8N2G4 141 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 EID2Q8N6I1 236 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 OR7G2Q8NG99 324 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 OR10R2Q8NGX6 335 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 UBALD1Q8TB05 177 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 SLC22A8Q8TCC7 542 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 SLC38A4Q969I6 547 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 FBXO32Q969P5 355 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 DNAJC19Q96DA6 116 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 CCDC126Q96EE4 140 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 GALNT14Q96FL9 552 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 MS4A4EQ96PG1 132 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 DNTTIP1Q9H147 329 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 NOX3Q9HBY0 568 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 ZDHHC4Q9NPG8 344 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 NECAP2Q9NVZ3 263 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 HOXC10Q9NYD6 342 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 UXTQ9UBK9 157 aaPredicted RBP1.33□□□□□ -2.2
CDC40-204ENST00000431461 HPCAL4Q9UM19 191 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 NEU3Q9UQ49 428 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 STARD10Q9Y365 291 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 ARHGAP21Q5T5U3 1957 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 MROH7-TTC4A0A0A0MT08 1334 aa1.33□□□□□ -2.2
CDC40-204ENST00000431461 AKNAQ7Z591 1439 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 TRBV11-1A0A0K0K1C0 115 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 A0A1W2PP18 115 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 A0A1W2PPV9 198 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 PLAC8L1A1L4L8 177 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 HEATR9A2RTY3 570 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 BTBD17A6NE02 478 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 FAM47DPA6NHR8 397 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 LRRIQ3A6PVS8 624 aaPredicted RBP1.32□□□□□ -2.2
CDC40-204ENST00000431461 ERVV-1B6SEH8 477 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 AIM2O14862 343 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 CHMP2AO43633 222 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 CTDNEP1O95476 244 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 NAA10P41227 235 aaPredicted RBP1.32□□□□□ -2.2
CDC40-204ENST00000431461 SLC1A1P43005 524 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 RFX3P48380 749 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 CCNHP51946 323 aaPredicted RBP1.32□□□□□ -2.2
CDC40-204ENST00000431461 CDH6P55285 790 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 GPX6P59796 221 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 RAB10P61026 200 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 ACTA2P62736 377 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 ACTC1P68032 377 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 EIF4EBP1Q13541 118 aaPredicted RBP1.32□□□□□ -2.2
CDC40-204ENST00000431461 GK3PQ14409 553 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 GUCA2BQ16661 112 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 VAX1Q5SQQ9 334 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 HES5Q5TA89 166 aa1.32□□□□□ -2.2
CDC40-204ENST00000431461 C9orf135Q5VTT2 229 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms