RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 NANOGNBQ7Z5D8 188 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 CAMK2N1Q7Z7J9 78 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 THOC6Q86W42 341 aaKnown RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 TRIM69Q86WT6 500 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 ENTHD1Q8IYW4 607 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 KIR2DL5AQ8N109 375 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF433Q8N7K0 673 aaPredicted RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 TRPV1Q8NER1 839 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 OR13C2Q8NGS9 318 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 OR2G2Q8NGZ5 317 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 OR6X1Q8NH79 312 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 KIR2DL5BQ8NHK3 375 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 FAM110BQ8TC76 370 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 BLOC1S5Q8TDH9 187 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 ACOT11Q8WXI4 607 aaPredicted RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 SMARCD2Q92925 531 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 STMN2Q93045 179 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 FBXO32Q969P5 355 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 MED8Q96G25 268 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 CNN2Q99439 309 aaKnown RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 NPY6RQ99463 290 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 RIOK2Q9BVS4 552 aaKnown RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 SLC25A39Q9BZJ4 359 aaPredicted RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 EML4Q9HC35 981 aaKnown RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 ZFP14Q9HCL3 533 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 ADAP2Q9NPF8 381 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 CCL28Q9NRJ3 127 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 GLRX2Q9NS18 164 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 HYPKQ9NX55 129 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 SLC25A37Q9NYZ2 338 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 EXTL2Q9UBQ6 330 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 HEBP2Q9Y5Z4 205 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 DCCP43146 1447 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 DDX60Q8IY21 1712 aaKnown RBP1.62□□□□□ -2.15
PTPRC-208ENST00000427110 ABCA3Q99758 1704 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 SHANK3Q9BYB0 1731 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 MRC1P22897 1456 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 PAPPAQ13219 1627 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 ANKRD36CQ5JPF3 1778 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 CHD4Q14839 1912 aa1.62□□□□□ -2.15
PTPRC-208ENST00000427110 ITGB4P16144 1822 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 NUP98P52948 1817 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 WNK3Q9BYP7 1800 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 TMEM94Q12767 1356 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 TJP1Q07157 1748 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 GLI3P10071 1580 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 NPHP4O75161 1426 aaPredicted RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 IGKV6D-21A0A0A0MT36 114 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 H3BNH8 94 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 FOXE1O00358 373 aaPredicted RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 MGRN1O60291 552 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 OR7A10O76100 309 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 KRT6AP02538 564 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 GAPDHP04406 335 aaKnown RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 CAPN1P07384 714 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 PLEKP08567 350 aaPredicted RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 CSF3P09919 207 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 UBTFL1P0CB47 393 aaPredicted RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 TOP1P11387 765 aaKnown RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 ATP1B2P14415 290 aaPredicted RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 ETS2P15036 469 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 CRISP2P16562 243 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 TCN1P20061 433 aaPredicted RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 CNR1P21554 472 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 OPRD1P41143 372 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 YAP1P46937 504 aaKnown RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 CCR6P51684 374 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 RPL23AP62750 156 aaKnown RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 REG3AQ06141 175 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 DDX39BQ13838 428 aaKnown RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 PSG5Q15238 335 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 ZBED5Q49AG3 693 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 C6orf226Q5I0X4 101 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 CTSL3PQ5NE16 218 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 AGBL2Q5U5Z8 902 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 C1orf94Q6P1W5 598 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 TRIM40Q6P9F5 258 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 CNIH2Q6PI25 160 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 IGFL2Q6UWQ7 119 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 COX15Q7KZN9 410 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF429Q86V71 674 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 NECAB1Q8N987 351 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 SDR9C7Q8NEX9 313 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 OR4F15Q8NGB8 312 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 OR1L6Q8NGR2 347 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 OR1N2Q8NGR9 330 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 DTX3LQ8TDB6 740 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 SDR42E1Q8WUS8 393 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 TMEM158Q8WZ71 300 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 IL22RA2Q969J5 263 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF285Q96NJ3 590 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 MS4A4EQ96PG1 132 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 OR8B4Q96RC9 309 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 SORT1Q99523 831 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 ECSITQ9BQ95 431 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 CHRDL1Q9BU40 450 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 DEFB127Q9H1M4 99 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 ANKRD19PQ9H560 264 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 LY9Q9HBG7 655 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 EXD2Q9NVH0 621 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms