RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SLC1A7O00341 560 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 CCL21O00585 134 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 ZNF91Q05481 1191 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 SNTB1Q13884 538 aaKnown RBP11.86□□□□□ -0.51
PRPF39-202ENST00000424478 CDSNQ15517 529 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 CORO6Q6QEF8 472 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 SPATC1Q76KD6 591 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 FAM214BQ7L5A3 538 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 LRRC18Q8N456 261 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 WBP1Q96G27 269 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 CLN6Q9NWW5 311 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 GLTPQ9NZD2 209 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 B9D1Q9UPM9 204 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 BAIAP2Q9UQB8 552 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 IL2RAP01589 272 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 APEHP13798 732 aaKnown RBP11.86□□□□□ -0.51
PRPF39-202ENST00000424478 GABRA1P14867 456 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 RBPJQ06330 500 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 CEACAM16Q2WEN9 425 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 GTF2IRD2BQ6EKJ0 949 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 ALKBH2Q6NS38 261 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 GTF2IRD2Q86UP8 949 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 LINC00346Q8IVM7 164 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 FAM26EQ8N5C1 309 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 ZNF610Q8N9Z0 462 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 APH1AQ96BI3 265 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 GMPPAQ96IJ6 420 aaPredicted RBP11.86□□□□□ -0.51
PRPF39-202ENST00000424478 TEAD3Q99594 435 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 ALG12Q9BV10 488 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 NDEL1Q9GZM8 345 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 MBD3L4A6NDZ8 208 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 MBD3L3A6NE82 208 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 MBD3L5A6NJ08 208 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 CD8B2A6NJW9 211 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 FCGR2AP12318 317 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 B4GALT1P15291 398 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 PAICSP22234 425 aaKnown RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 SLC2A5P22732 501 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 C21orf33P30042 268 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 SNRPGP62308 76 aaKnown RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 TUBA1BP68363 451 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 TUBA4AP68366 448 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 TUBA1AQ71U36 451 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 MBD3L2Q8NHZ7 208 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 STARD4Q96DR4 205 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 RNFT2Q96EX2 444 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 NMNAT2Q9BZQ4 307 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 EMC3Q9P0I2 261 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 H2AFY2Q9P0M6 372 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 KLHL21Q9UJP4 597 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 FOXD3Q9UJU5 478 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 IGLV1-36A0A0B4J1U3 117 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 EEF1E1-BLOC1S5C9J1V9 151 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 EEF1E1O43324 174 aaKnown RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 SS18L1O75177 396 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 SLC43A1O75387 559 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 LYZL6O75951 148 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 TFP02787 698 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 DBTP11182 482 aaKnown RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 EEF1B2P24534 225 aaKnown RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 ROR2Q01974 943 aaKnown RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 LINC01590Q5TEZ4 76 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 ERI1Q8IV48 349 aaKnown RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 GPR137CQ8N3F9 429 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 NMD3Q96D46 503 aaKnown RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 SLCO5A1Q9H2Y9 848 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 VSX1Q9NZR4 365 aaPredicted RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 ERVK-18Q9QC07 812 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 COMMD3-BMI1R4GMX3 469 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 LRBAP50851 2863 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 GPR171O14626 319 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 LRRTM2O43300 516 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 IDH3BO43837 385 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 WNT11O96014 354 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 CD79BP40259 229 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 IL18R1Q13478 541 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 SGCAQ16586 387 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 NXNL2Q5VZ03 156 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 TMEM154Q6P9G4 183 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 C20orf196Q8IYI0 205 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 ZNF540Q8NDQ6 660 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 GGHQ92820 318 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 SH3GL3Q99963 347 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 PRRG3Q9BZD7 231 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 CCDC90BQ9GZT6 254 aa11.85□□□□□ -0.51
PRPF39-202ENST00000424478 MRPL22Q9NWU5 206 aaKnown RBP11.85□□□□□ -0.51
PRPF39-202ENST00000424478 A6NIZ1 184 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 ATP6V1E1P36543 226 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 RAP1BP61224 184 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 RAP1AP62834 184 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 CRYBG3Q68DQ2 2970 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 MEPCEQ7L2J0 689 aaKnown RBP11.84□□□□□ -0.51
PRPF39-202ENST00000424478 ADCK1Q86TW2 530 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 FBLIM1Q8WUP2 373 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 RBP7Q96R05 134 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 TM9SF2Q99805 663 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 UPB1Q9UBR1 384 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 DOC2BQ14184 412 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 GUSBP1Q15486 140 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 PLEKHG7Q6ZR37 379 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms