RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ACOT8O14734 319 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 GSC2O15499 205 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 DIRAS1O95057 198 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 IGFBP1P08833 259 aaPredicted RBP13.11□□□□□ -0.31
USB1-202ENST00000423271 PGA4P0DJD7 388 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 PGA3P0DJD8 388 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 IGHV4-31P0DP07 118 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 USF1P22415 310 aaPredicted RBP13.11□□□□□ -0.31
USB1-202ENST00000423271 RUNX1T1Q06455 604 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 RPL18Q07020 188 aaKnown RBP13.11□□□□□ -0.31
USB1-202ENST00000423271 ST3GAL3Q11203 375 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 GGTLC2Q14390 218 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 IQCCQ4KMZ1 466 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 LRFN4Q6PJG9 635 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 CYP4Z1Q86W10 505 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 SKA3Q8IX90 412 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 ZNF566Q969W8 418 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 SLC25A44Q96H78 314 aaPredicted RBP13.11□□□□□ -0.31
USB1-202ENST00000423271 DOK1Q99704 481 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 PIMREGQ9BSJ6 248 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 MAN2C1Q9NTJ4 1040 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 C20orf141Q9NUB4 165 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 NDUFAF4Q9P032 175 aa13.11□□□□□ -0.31
USB1-202ENST00000423271 SH3PXD2BA1X283 911 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 BLOC1S5-TXNDC5H3BN57 136 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 PIP5K1CO60331 668 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 OR7A10O76100 309 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 RAB36O95755 333 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 MT-ND1P03886 318 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 HIST1H2ABP04908 130 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 F13BP05160 661 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 ZNF35P13682 527 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 NR4A1P22736 598 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 IFNA8P32881 189 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 RBM34P42696 430 aaKnown RBP13.1□□□□□ -0.31
USB1-202ENST00000423271 NR4A2P43354 598 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 RASSF2P50749 326 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 RAB1AP62820 205 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 RAB39AQ14964 217 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 MTX3Q5HYI7 312 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 HIST3H2AQ7L7L0 130 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 HIPK1Q86Z02 1210 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 ZNF584Q8IVC4 421 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 IL17RDQ8NFM7 739 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 TMEM239Q8WW34 195 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 HIST1H2ACQ93077 130 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 MCUR1Q96AQ8 359 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 SGTBQ96EQ0 304 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 FOXN4Q96NZ1 517 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 SEPHS2Q99611 448 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 TMEM38BQ9NVV0 291 aa13.1□□□□□ -0.31
USB1-202ENST00000423271 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.1□□□□□ -0.315e-11■■□□□ 11.9
USB1-202ENST00000423271 IGHV4-61A0A0C4DH41 118 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 NDUFS8O00217 210 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 DHHO43323 396 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 UBL3O95164 117 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 BCL10O95999 233 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 FABP3P05413 133 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 QDPRP09417 244 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 RHCEP18577 417 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 FUT1P19526 365 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 AQP2P41181 271 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 LSM11P83369 360 aaKnown RBP eCLIP13.09□□□□□ -0.311e-9■■■■■ 34.8
USB1-202ENST00000423271 MYBPC1Q00872 1141 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 TRAP1Q12931 704 aaKnown RBP13.09□□□□□ -0.31
USB1-202ENST00000423271 TRAM2Q15035 370 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 PIWIL3Q7Z3Z3 882 aaKnown RBP13.09□□□□□ -0.31
USB1-202ENST00000423271 SLC22A24Q8N4F4 322 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 NOXO1Q8NFA2 376 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 MOSPD2Q8NHP6 518 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 LRGUKQ96M69 825 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 ZNF347Q96SE7 839 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 SH3GL3Q99963 347 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 MRPL37Q9BZE1 423 aaKnown RBP13.09□□□□□ -0.31
USB1-202ENST00000423271 BPESC1Q9GZL8 116 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 RAB1BQ9H0U4 201 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 LRMDAQ9H2I8 198 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 NMNAT1Q9HAN9 279 aaPredicted RBP13.09□□□□□ -0.31
USB1-202ENST00000423271 DYNLRB1Q9NP97 96 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 MED31Q9Y3C7 131 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 FAM32AQ9Y421 112 aaKnown RBP13.09□□□□□ -0.31
USB1-202ENST00000423271 CMAHPQ9Y471 501 aa13.09□□□□□ -0.31
USB1-202ENST00000423271 MXRA5Q9NR99 2828 aa13.08□□□□□ -0.31
USB1-202ENST00000423271 LOC390937A0A1W2PQ73 354 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 VSTM5A8MXK1 200 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 STAMBPO95630 424 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 IGHG1P01857 330 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 ADRA2AP08913 450 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 ITGA2P17301 1181 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 CLRN1P58418 232 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 CYB5R2Q6BCY4 276 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 CCDC121Q6ZUS5 278 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 ZDHHC21Q8IVQ6 265 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 SYT14Q8NB59 555 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 OR4K5Q8NGD3 323 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 ASB10Q8WXI3 467 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 MCHR2Q969V1 340 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 MRPL24Q96A35 216 aaKnown RBP13.08□□□□□ -0.32
USB1-202ENST00000423271 SYT3Q9BQG1 590 aa13.08□□□□□ -0.32
USB1-202ENST00000423271 TRIM15Q9C019 465 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms