RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 BHLHE40O14503 412 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 CASKO14936 926 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 ARPC3O15145 178 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 DHHO43323 396 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 IDH3BO43837 385 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 SEC14L2O76054 403 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 SLC2A10O95528 541 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 THBDP07204 575 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 EPXP11678 715 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 PPP3CBP16298 524 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 HIST1H1CP16403 213 aaKnown RBP8.13□□□□□ -1.11
PDGFC-202ENST00000422544 CDKN2AP42771 156 aaKnown RBP8.13□□□□□ -1.11
PDGFC-202ENST00000422544 RIPPLY3P57055 190 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 ELF3P78545 371 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-202ENST00000422544 FMODQ06828 376 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 DBPQ10586 325 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-202ENST00000422544 TAB1Q15750 504 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 HIKESHIQ53FT3 197 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 THEM4Q5T1C6 240 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 OR7E24Q6IFN5 339 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 SLC25A47Q6Q0C1 308 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 PTCHD4Q6ZW05 846 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 WFDC8Q8IUA0 241 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 IQCF1Q8N6M8 205 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 WDR31Q8NA23 367 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 OR52E2Q8NGJ4 325 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 OR1K1Q8NGR3 316 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 OR4K13Q8NH42 304 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 OR52N5Q8NH56 324 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 TEX47Q8TBZ9 253 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 FAM222BQ8WU58 562 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 HSD17B8Q92506 261 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 BCL2L2Q92843 193 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-202ENST00000422544 NMNAT3Q96T66 252 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 CIB1Q99828 191 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 USB1Q9BQ65 265 aaKnown RBP8.13□□□□□ -1.11
PDGFC-202ENST00000422544 GABARAPL1Q9H0R8 117 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 SLC17A5Q9NRA2 495 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 AHCYL1O43865 530 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 ANPEPP15144 967 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 B4GALT1P15291 398 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 CDAP32320 146 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 GIPRP48546 466 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF133P52736 654 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-202ENST00000422544 SH3BGRP55822 239 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-202ENST00000422544 TUBA1BP68363 451 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 TUBA4AP68366 448 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 GINS1Q14691 196 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 PPA1Q15181 289 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 RCN1Q15293 331 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 ETFDHQ16134 617 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 TBRG1Q3YBR2 411 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 TIMM23BQ5SRD1 257 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF362Q5T0B9 420 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-202ENST00000422544 TMEM236Q5W0B7 351 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 KDM4DQ6B0I6 523 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 ACSM5Q6NUN0 579 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 LEG1Q6P5S2 330 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 ANKRD16Q6P6B7 361 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF813Q6ZN06 617 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 TUBA1AQ71U36 451 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 ADCK1Q86TW2 530 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 P2RY8Q86VZ1 359 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 JAZF1Q86VZ6 243 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 LNX2Q8N448 690 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 C1orf162Q8NEQ5 155 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-202ENST00000422544 SDR9C7Q8NEX9 313 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 OR2T33Q8NG76 320 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 FNDC8Q8TC99 324 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 DNAJC9Q8WXX5 260 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 HTRA1Q92743 480 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 MUCL1Q96DR8 90 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 FOXB1Q99853 325 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 OSBPL10Q9BXB5 764 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 C1QTNF6Q9BXI9 259 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 SYT4Q9H2B2 425 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 NELFAQ9H3P2 528 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 RERGLQ9H628 205 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 SLC24A3Q9HC58 644 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 SRA1Q9HD15 236 aaKnown RBP8.12□□□□□ -1.11
PDGFC-202ENST00000422544 KRT84Q9NSB2 600 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF226Q9NYT6 803 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 VSX1Q9NZR4 365 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-202ENST00000422544 KCNN3Q9UGI6 736 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 TMEFF2Q9UIK5 374 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-202ENST00000422544 BAIAP2Q9UQB8 552 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 UGT2A1Q9Y4X1 527 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 SLC25A15Q9Y619 301 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 HCFC1P51610 2035 aa8.12□□□□□ -1.11
PDGFC-202ENST00000422544 OR6C68A6NDL8 312 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 SLC16A7O60669 478 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 RENP00797 406 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 NR2C1P13056 603 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 CTLA4P16410 223 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 IGFBP5P24593 272 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 HOXC12P31275 282 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 POLR2IP36954 125 aaKnown RBP8.11□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF84P51523 738 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 CRISP1P54107 249 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 UBE2NP61088 152 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms