RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 RASSF6Q6ZTQ3 369 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 SLC22A24Q8N4F4 322 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 ATG16L2Q8NAA4 619 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 HTRA1Q92743 480 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 RADILQ96JH8 1075 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 SH3GL3Q99963 347 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 NIPSNAP1Q9BPW8 284 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 BDH2Q9BUT1 245 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 DGCR6LQ9BY27 220 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 KCNN2Q9H2S1 579 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 DENND2DQ9H6A0 471 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-202ENST00000421712 RNF121Q9H920 327 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 TBC1D23Q9NUY8 699 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 ARMC1Q9NVT9 282 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 POU2F3Q9UKI9 436 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 CDH10Q9Y6N8 788 aa13.76□□□□□ -0.21
BRAT1-202ENST00000421712 A0A1W2PPL8 197 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 A0A1W2PPR1 153 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 SLC22A23A1A5C7 686 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 PRSS37A4D1T9 235 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 SOX14O95416 240 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 FCGR1AP12314 374 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 CENPAP49450 140 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 ACTR3P61158 418 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 COX10Q12887 443 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 SLC35F1Q5T1Q4 408 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 C10orf128Q5T292 105 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 SLC25A47Q6Q0C1 308 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 YTHDF3Q7Z739 585 aaKnown RBP13.75□□□□□ -0.21
BRAT1-202ENST00000421712 AMIGO2Q86SJ2 522 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 MDP1Q86V88 176 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 SKA3Q8IX90 412 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 C10orf67Q8IYJ2 551 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 HS3ST5Q8IZT8 346 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 LRRC18Q8N456 261 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 PYDC1Q8WXC3 89 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 AKAP1Q92667 903 aaKnown RBP eCLIP13.75□□□□□ -0.21
BRAT1-202ENST00000421712 TSSK6Q9BXA6 273 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 LIME1Q9H400 295 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 PLEKHF2Q9H8W4 249 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 SMURF2Q9HAU4 748 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 MOV10Q9HCE1 1003 aaKnown RBP13.75□□□□□ -0.21
BRAT1-202ENST00000421712 KIF17Q9P2E2 1029 aa13.75□□□□□ -0.21
BRAT1-202ENST00000421712 IGKV1D-43A0A0B4J1Z2 117 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 ARRDC5A6NEK1 342 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 H3BN98 237 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 IMPA2O14732 288 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 IDH3BO43837 385 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 AHCYL1O43865 530 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 SLC16A7O60669 478 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 UBL3O95164 117 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 RAB36O95755 333 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 RENP00797 406 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 IGFBP1P08833 259 aaPredicted RBP13.74□□□□□ -0.21
BRAT1-202ENST00000421712 PATE4P0C8F1 98 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 APEHP13798 732 aaKnown RBP13.74□□□□□ -0.21
BRAT1-202ENST00000421712 ANXA8P13928 327 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 CBR1P16152 277 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 NPR2P20594 1047 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 POU1F1P28069 291 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 ARR3P36575 388 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 CDKN2AP42771 156 aaKnown RBP13.74□□□□□ -0.21
BRAT1-202ENST00000421712 PTDSS1P48651 473 aaKnown RBP13.74□□□□□ -0.21
BRAT1-202ENST00000421712 IDH3GP51553 393 aaPredicted RBP13.74□□□□□ -0.21
BRAT1-202ENST00000421712 KEAP1Q14145 624 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 ATP6AP1Q15904 470 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 GSG1Q2KHT4 349 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 LEG1Q6P5S2 330 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 SHQ1Q6PI26 577 aaKnown RBP13.74□□□□□ -0.21
BRAT1-202ENST00000421712 ZNF627Q7L945 461 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 SLC16A14Q7RTX9 510 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 ADCK1Q86TW2 530 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 CDH24Q86UP0 819 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 KBTBD8Q8NFY9 601 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 OR52E2Q8NGJ4 325 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 OR4K13Q8NH42 304 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 OR5K1Q8NHB7 308 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 TEX47Q8TBZ9 253 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 LRTOMTQ8WZ04 291 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 DUS3LQ96G46 650 aaKnown RBP13.74□□□□□ -0.21
BRAT1-202ENST00000421712 SLC38A2Q96QD8 506 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 SYT4Q9H2B2 425 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 NTN4Q9HB63 628 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 IL20Q9NYY1 176 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 ATP23Q9Y6H3 246 aa13.74□□□□□ -0.21
BRAT1-202ENST00000421712 IGHV1-18A0A0C4DH31 117 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 G3V2T6 193 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 ARPC3O15145 178 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 KHDRBS3O75525 346 aaKnown RBP13.73□□□□□ -0.21
BRAT1-202ENST00000421712 TXNDC12O95881 172 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 HIST1H1CP16403 213 aaKnown RBP13.73□□□□□ -0.21
BRAT1-202ENST00000421712 ZNF23P17027 643 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 DNASE1P24855 282 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 GIPRP48546 466 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 ZNF133P52736 654 aaPredicted RBP13.73□□□□□ -0.21
BRAT1-202ENST00000421712 RAB1AP62820 205 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 GABPB1Q06547 395 aaPredicted RBP13.73□□□□□ -0.21
BRAT1-202ENST00000421712 SPOCK1Q08629 439 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 ETFDHQ16134 617 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 SLC36A2Q495M3 483 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms