RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 A6NIZ1 184 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 SHISA9B4DS77 424 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 M0R1B8 84 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 ABCD4O14678 606 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 HS3ST1O14792 307 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 SEC14L2O76054 403 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 IGKV3-15P01624 115 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 IGLV1-44P01699 117 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 RAF1P04049 648 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 CBR1P16152 277 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 ACVR1BP36896 505 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 IST1P53990 364 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 RAP1BP61224 184 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 RAP1AP62834 184 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 ERVK-25P63136 954 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 TSPAN31Q12999 210 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 GK3PQ14409 553 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 OCLNQ16625 522 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 NRN1LQ496H8 165 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 PGBD2Q6P3X8 592 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 ZNF813Q6ZN06 617 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 C8orf86Q6ZUL3 223 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 ASRGL1Q7L266 308 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 ARIH2OSQ8N7S6 290 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 ZNF611Q8N823 705 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 SYT14Q8NB59 555 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 FNDC8Q8TC99 324 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 GNPDA2Q8TDQ7 276 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 IGFBPL1Q8WX77 278 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 AKAP1Q92667 903 aaKnown RBP eCLIP9.16□□□□□ -0.94
RFC1-203ENST00000418436 MBD6Q96DN6 1003 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 ALG12Q9BV10 488 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 KATNB1Q9BVA0 655 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 C1QTNF6Q9BXI9 259 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 NDEL1Q9GZM8 345 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 REEP1Q9H902 201 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 CCM2LQ9NUG4 571 aaPredicted RBP9.16□□□□□ -0.94
RFC1-203ENST00000418436 TMEM38BQ9NVV0 291 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 ZNF224Q9NZL3 707 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 PLEKHA6Q9Y2H5 1048 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 ADAM18Q9Y3Q7 739 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 AKAP6Q13023 2319 aa9.16□□□□□ -0.94
RFC1-203ENST00000418436 IGHV1-18A0A0C4DH31 117 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 AHCYL1O43865 530 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 MGRN1O60291 552 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 CCNB2O95067 398 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 TXNDC12O95881 172 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 GASTP01350 101 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 NR2C1P13056 603 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 APEHP13798 732 aaKnown RBP9.15□□□□□ -0.94
RFC1-203ENST00000418436 B4GALT1P15291 398 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 CD53P19397 219 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 DNASE1P24855 282 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 ARR3P36575 388 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 RPL4P36578 427 aaKnown RBP9.15□□□□□ -0.94
RFC1-203ENST00000418436 TUBA1BP68363 451 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 TUBA4AP68366 448 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 MYBPC1Q00872 1141 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 PPP1R8Q12972 351 aaKnown RBP9.15□□□□□ -0.94
RFC1-203ENST00000418436 TOP3AQ13472 1001 aaPredicted RBP9.15□□□□□ -0.94
RFC1-203ENST00000418436 MICAQ29983 383 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 RFX4Q33E94 735 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 ZNF672Q499Z4 452 aaPredicted RBP9.15□□□□□ -0.94
RFC1-203ENST00000418436 THEM4Q5T1C6 240 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 GPR139Q6DWJ6 353 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 SLC25A47Q6Q0C1 308 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 SMARCD3Q6STE5 483 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 DPY19L2P2Q6ZN68 376 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 TUBA1AQ71U36 451 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 SPATA24Q86W54 205 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 SKA3Q8IX90 412 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 SLC22A24Q8N4F4 322 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 KBTBD8Q8NFY9 601 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 OR9Q2Q8NGE9 314 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 NEUROG1Q92886 237 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 SLCO4A1Q96BD0 722 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 Q96M85 177 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 ZNF75AQ96N20 296 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 SLC38A2Q96QD8 506 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 DENND2DQ9H6A0 471 aaPredicted RBP9.15□□□□□ -0.94
RFC1-203ENST00000418436 UBTD1Q9HAC8 227 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 GRHPRQ9UBQ7 328 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 SAMHD1Q9Y3Z3 626 aaKnown RBP9.15□□□□□ -0.94
RFC1-203ENST00000418436 UGT2A1Q9Y4X1 527 aa9.15□□□□□ -0.94
RFC1-203ENST00000418436 AKAP9Q99996 3911 aa9.15□□□□□ -0.95
RFC1-203ENST00000418436 ROS1P08922 2347 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 OTOGQ6ZRI0 2925 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 IGKV1D-43A0A0B4J1Z2 117 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 SLC22A23A1A5C7 686 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 IMPA2O14732 288 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 ARPC3O15145 178 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 ARHGEF9O43307 516 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 FKBP6O75344 327 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 SLC2A10O95528 541 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 CST1P01037 141 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 HLA-HP01893 362 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 DANCRP0C864 163 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 OR8G3PP0DMU2 310 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 SDHAP31040 664 aa9.14□□□□□ -0.95
RFC1-203ENST00000418436 ZNF84P51523 738 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms