RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 ALKBH1Q13686 389 aaKnown RBP12.1□□□□□ -0.47
BDNF-208ENST00000418212 PPA1Q15181 289 aa12.1□□□□□ -0.47
BDNF-208ENST00000418212 EXOSC6Q5RKV6 272 aaKnown RBP12.1□□□□□ -0.47
BDNF-208ENST00000418212 CAMKMTQ7Z624 323 aa12.1□□□□□ -0.47
BDNF-208ENST00000418212 CCDC71Q8IV32 467 aaPredicted RBP12.1□□□□□ -0.47
BDNF-208ENST00000418212 MISPQ8IVT2 679 aa12.1□□□□□ -0.47
BDNF-208ENST00000418212 DUS3LQ96G46 650 aaKnown RBP12.1□□□□□ -0.47
BDNF-208ENST00000418212 THOC3Q96J01 351 aaKnown RBP12.1□□□□□ -0.47
BDNF-208ENST00000418212 ARRDC1-AS1Q9H2J1 176 aa12.1□□□□□ -0.47
BDNF-208ENST00000418212 NARFLQ9H6Q4 476 aa12.1□□□□□ -0.47
BDNF-208ENST00000418212 EMC7Q9NPA0 242 aa12.1□□□□□ -0.47
BDNF-208ENST00000418212 CMC2Q9NRP2 79 aa12.1□□□□□ -0.47
BDNF-208ENST00000418212 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 TNFSF12O43508 249 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 PAPLNO95428 1278 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 FCGR2AP12318 317 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 EPHA1P21709 976 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 EMDP50402 254 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 SLC35A1P78382 337 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 FZD2Q14332 565 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 IDO2Q6ZQW0 420 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 OR6F1Q8NGZ6 308 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 DVL3Q92997 716 aaPredicted RBP12.09□□□□□ -0.47
BDNF-208ENST00000418212 PIGTQ969N2 578 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 SYT3Q9BQG1 590 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 KCNIP1Q9NZI2 227 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 ASH2LQ9UBL3 628 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 SMCO3A2RU48 225 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 SHISA7A6NL88 538 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 ANKRD30BLA7E2S9 258 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 PRICKLE3O43900 615 aaPredicted RBP12.09□□□□□ -0.47
BDNF-208ENST00000418212 SLC43A1O75387 559 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 PIAS2O75928 621 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 CD63P08962 238 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 ZGLP1P0C6A0 271 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 P2RX1P51575 399 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 VN1R4Q7Z5H5 301 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 CLDN22Q8N7P3 220 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 OR52N1Q8NH53 320 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 SEC22AQ96IW7 307 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 PHB2Q99623 299 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 MFFQ9GZY8 342 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 C12orf49Q9H741 205 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 LIN7BQ9HAP6 207 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 POLE3Q9NRF9 147 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 ZNFX1Q9P2E3 1918 aaKnown RBP12.09□□□□□ -0.47
BDNF-208ENST00000418212 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.09□□□□□ -0.47
BDNF-208ENST00000418212 GAAP10253 952 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 HTR2CP28335 458 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 MRPL19P49406 292 aaKnown RBP12.09□□□□□ -0.47
BDNF-208ENST00000418212 RGS19P49795 217 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 MECP2P51608 486 aaKnown RBP12.09□□□□□ -0.47
BDNF-208ENST00000418212 ARL6IP1Q15041 203 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 HLA-BQ31612 363 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 LANCL3Q6ZV70 420 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 CALHM3Q86XJ0 350 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 OR4M1Q8NGD0 313 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 SLC7A6Q92536 515 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 OR2A5Q96R48 311 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 TMEM59Q9BXS4 323 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 ENY2Q9NPA8 101 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 OBP2BQ9NPH6 170 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 MUTYHQ9UIF7 546 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 WIF1Q9Y5W5 379 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 BRWD3Q6RI45 1802 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 KCNE1BA0A087WTH5 132 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 BORCS7-ASMTA0A0B4J1R7 106 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 LOC102725191A0A1B0GVB3 256 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 SSX5O60225 188 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 CSF1P09603 554 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 PRPH2P23942 346 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 GABREP78334 506 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 CMIPQ8IY22 773 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 ZNF709Q8N972 641 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 TEX19Q8NA77 164 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 FAM71CQ8NEG0 241 aa12.09□□□□□ -0.47
BDNF-208ENST00000418212 C11orf54Q9H0W9 315 aaPredicted RBP12.09□□□□□ -0.47
BDNF-208ENST00000418212 TMEFF2Q9UIK5 374 aaPredicted RBP12.09□□□□□ -0.47
BDNF-208ENST00000418212 ZNF346Q9UL40 294 aaKnown RBP12.09□□□□□ -0.47
BDNF-208ENST00000418212 TRDV1A0A1B0GX56 115 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 AGPAT2O15120 278 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 AKR7A2O43488 359 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 EML2O95834 649 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 RAB40ALP0C0E4 278 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 SPI1P17947 270 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 BLVRBP30043 206 aaPredicted RBP12.08□□□□□ -0.48
BDNF-208ENST00000418212 RAB40AQ8WXH6 277 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 C1QTNF6Q9BXI9 259 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 FSCN3Q9NQT6 498 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 EHFQ9NZC4 300 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 DUSP13Q9UII6 198 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 TEX51A0A1B0GUA7 166 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 HLA-AP01891 365 aaKnown RBP12.08□□□□□ -0.48
BDNF-208ENST00000418212 IL9P15248 144 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 DDOSTP39656 456 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 CCR6P51684 374 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 RPL27P61353 136 aaKnown RBP12.08□□□□□ -0.48
BDNF-208ENST00000418212 SLC9A3R2Q15599 337 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 LTC4SQ16873 150 aa12.08□□□□□ -0.48
BDNF-208ENST00000418212 GUSBP11Q6P575 273 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms