RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 PDP1Q9P0J1 537 aaPredicted RBP20.8■□□□□ 0.92
UBE2E3-202ENST00000410062 MGAT4BQ9UQ53 548 aa20.8■□□□□ 0.92
UBE2E3-202ENST00000410062 CD79AP11912 226 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 NR2C1P13056 603 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 CDAP32320 146 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 PIGFQ07326 219 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 CLEC12AQ5QGZ9 265 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 SLC25A47Q6Q0C1 308 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 MDP1Q86V88 176 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 SKA3Q8IX90 412 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 CCDC36Q8IYA8 594 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 LILRB1Q8NHL6 650 aaPredicted RBP20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 SH3GL3Q99963 347 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 PLA2G12AQ9BZM1 189 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 NTN4Q9HB63 628 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 ZNF224Q9NZL3 707 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 UGT2A1Q9Y4X1 527 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 AP4S1Q9Y587 144 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 CDH10Q9Y6N8 788 aa20.79■□□□□ 0.92
UBE2E3-202ENST00000410062 IGHV1-18A0A0C4DH31 117 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 SLC22A23A1A5C7 686 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 PRSS37A4D1T9 235 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 IMPA2O14732 288 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 IGFBP1P08833 259 aaPredicted RBP20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 OR8G3PP0DMU2 310 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 RASSF6Q6ZTQ3 369 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 FNDC8Q8TC99 324 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 AKAP1Q92667 903 aaKnown RBP eCLIP20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 NOX3Q9HBY0 568 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 ARMC1Q9NVT9 282 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 B3GNT2Q9NY97 397 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 ST6GALNAC2Q9UJ37 374 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 PLEKHA6Q9Y2H5 1048 aa20.78■□□□□ 0.92
UBE2E3-202ENST00000410062 HEATR1Q9H583 2144 aaKnown RBP20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 TXNDC12O95881 172 aa20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 PATE4P0C8F1 98 aa20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 APEHP13798 732 aaKnown RBP20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 PAMR1Q6UXH9 720 aa20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 PTCHD4Q6ZW05 846 aa20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 FGFBP3Q8TAT2 258 aa20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 DUS3LQ96G46 650 aaKnown RBP20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 SLC38A2Q96QD8 506 aa20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 SEC61A2Q9H9S3 476 aa20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 IL20Q9NYY1 176 aa20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 CRNNQ9UBG3 495 aaPredicted RBP20.77■□□□□ 0.92
UBE2E3-202ENST00000410062 ARRDC5A6NEK1 342 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 SHISA9B4DS77 424 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 DEAF1O75398 565 aaPredicted RBP20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 SOX14O95416 240 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 IGKV3-15P01624 115 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 CELA3BP08861 270 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 CBR1P16152 277 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 PRKACGP22612 351 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 CDKN2AP42771 156 aaKnown RBP20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 NPRL3Q12980 569 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 KPNB1Q14974 876 aaKnown RBP20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 ETFDHQ16134 617 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 RPL13AP3Q6NVV1 102 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 SLC22A25Q6T423 547 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 MYPOPQ86VE0 399 aaPredicted RBP20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 OR52L1Q8NGH7 329 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 OR8D4Q8NGM9 314 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 DENND2DQ9H6A0 471 aaPredicted RBP20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 RAI1Q7Z5J4 1906 aaPredicted RBP20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 ARPC3O15145 178 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 FARS2O95363 451 aaKnown RBP20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 CECR9P0C854 216 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 GSTM3P21266 225 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 PAX7P23759 505 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 NOS3P29474 1203 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 IDH3GP51553 393 aaPredicted RBP20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 ACTR3P61158 418 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 GSG1Q2KHT4 349 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 LRRC18Q8N456 261 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 NANOS1Q8WY41 292 aaKnown RBP20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 SYT4Q9H2B2 425 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 TBC1D23Q9NUY8 699 aa20.76■□□□□ 0.91
UBE2E3-202ENST00000410062 HS3ST1O14792 307 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 AHCYL1O43865 530 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 IGLV1-44P01699 117 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 TP53P04637 393 aaPredicted RBP20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 HIST1H1CP16403 213 aaKnown RBP20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 ARR3P36575 388 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 PTDSS1P48651 473 aaKnown RBP20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 RAB1AP62820 205 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 MRPS34P82930 218 aaKnown RBP20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 ATP6AP1Q15904 470 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 SGCAQ16586 387 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 ZNF672Q499Z4 452 aaPredicted RBP20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 SLC35F1Q5T1Q4 408 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 ADCK1Q86TW2 530 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 FAM169BQ8N8A8 192 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 OR4K13Q8NH42 304 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 NABP1Q96AH0 204 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 RERGLQ9H628 205 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 MOV10Q9HCE1 1003 aaKnown RBP20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 VSX1Q9NZR4 365 aaPredicted RBP20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 MOKQ9UQ07 419 aa20.75■□□□□ 0.91
UBE2E3-202ENST00000410062 A0A1W2PPL8 197 aa20.74■□□□□ 0.91
UBE2E3-202ENST00000410062 BHLHE40O14503 412 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms