RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 B3GNT2Q9NY97 397 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 CDH10Q9Y6N8 788 aa17.31■□□□□ 0.36
PDLIM2-207ENST00000409417 TEX13CA0A0J9YWL9 993 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 PRSS37A4D1T9 235 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 ZNF503-AS2A6NEH8 195 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 SHISA9B4DS77 424 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 HS3ST1O14792 307 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 MGRN1O60291 552 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 E2F6O75461 281 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 IGKV3-15P01624 115 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 IGLV1-44P01699 117 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 HLA-HP01893 362 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 GSTM3P21266 225 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 ARR3P36575 388 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 KRR1Q13601 381 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 SLC25A47Q6Q0C1 308 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 CD300LDQ6UXZ3 194 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 RASSF6Q6ZTQ3 369 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 ADCK1Q86TW2 530 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 LILRB1Q8NHL6 650 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 NANOS1Q8WY41 292 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 NSMAFQ92636 917 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 AKAP1Q92667 903 aaKnown RBP eCLIP17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 NINJ1Q92982 152 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 GTPBP3Q969Y2 492 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 RASD2Q96D21 266 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 DUS3LQ96G46 650 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 SAMD8Q96LT4 415 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 IFT27Q9BW83 186 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 DENND2DQ9H6A0 471 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 UBTD1Q9HAC8 227 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 ARMC1Q9NVT9 282 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 IL20Q9NYY1 176 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 ZNF224Q9NZL3 707 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 UGT2A1Q9Y4X1 527 aa17.3■□□□□ 0.36
PDLIM2-207ENST00000409417 IGKV1D-43A0A0B4J1Z2 117 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 SLC22A23A1A5C7 686 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 H7C1C5 153 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 IMPA2O14732 288 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 IDH3BO43837 385 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 DEAF1O75398 565 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 TIPRLO75663 272 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 FARS2O95363 451 aaKnown RBP17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 PPP1R3DO95685 299 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 RAF1P04049 648 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 LCN6P62502 163 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 MRPS34P82930 218 aaKnown RBP17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 SLC22A25Q6T423 547 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 C20orf204Q6ZNR8 217 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 TMEM179BQ7Z7N9 219 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 MDP1Q86V88 176 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 SKA3Q8IX90 412 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 KBTBD8Q8NFY9 601 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 ERMAPQ96PL5 475 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 FEVQ99581 238 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 SIAEQ9HAT2 523 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 PLEKHA6Q9Y2H5 1048 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 AP4S1Q9Y587 144 aa17.29■□□□□ 0.36
PDLIM2-207ENST00000409417 IGHV1-18A0A0C4DH31 117 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 UBL3O95164 117 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 ATE1O95260 518 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 CD79AP11912 226 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 NPR2P20594 1047 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 DNASE1P24855 282 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 SPOCK1Q08629 439 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 COX10Q12887 443 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 KEAP1Q14145 624 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 GSG1Q2KHT4 349 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 ZNF672Q499Z4 452 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 DPPA2Q7Z7J5 298 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 DEPDC4Q8N2C3 294 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 OR52L1Q8NGH7 329 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 EGLN3Q9H6Z9 239 aa17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 VSX1Q9NZR4 365 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 PDP1Q9P0J1 537 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-207ENST00000409417 SOCS2O14508 198 aa17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 NOS3P29474 1203 aa17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 CDAP32320 146 aa17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 PIGFQ07326 219 aa17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 CLEC12AQ5QGZ9 265 aa17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 PTCHD4Q6ZW05 846 aa17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 YTHDF3Q7Z739 585 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 ZNF611Q8N823 705 aa17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 HTRA1Q92743 480 aa17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 SH3GL3Q99963 347 aa17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 HEATR1Q9H583 2144 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 NTN4Q9HB63 628 aa17.27■□□□□ 0.36
PDLIM2-207ENST00000409417 OTOGQ6ZRI0 2925 aa17.27■□□□□ 0.35
PDLIM2-207ENST00000409417 CECR9P0C854 216 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 CDKN2AP42771 156 aaKnown RBP17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 GUCA1AP43080 201 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 GIPRP48546 466 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 IDH3GP51553 393 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 ARHGDIAP52565 204 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 ACTR3P61158 418 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 RAB1AP62820 205 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 NPRL3Q12980 569 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 ATP6AP1Q15904 470 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 NEUROG1Q92886 237 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms