RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 HTRA1Q92743 480 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 MCHR2Q969V1 340 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 FAM162AQ96A26 154 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 BPIFA2Q96DR5 249 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 SEPHS2Q99611 448 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 DOK1Q99704 481 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 KCTD14Q9BQ13 255 aaPredicted RBP7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 WACQ9BTA9 647 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 BCL2L14Q9BZR8 327 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 TXNIPQ9H3M7 391 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 SEC61A2Q9H9S3 476 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 CCNB1IP1Q9NPC3 277 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 KCNS2Q9ULS6 477 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 HIF3AQ9Y2N7 669 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 FAM32AQ9Y421 112 aaKnown RBP7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 CR1P17927 2039 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 CHD3Q12873 2000 aaKnown RBP7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 SONP18583 2426 aaKnown RBP7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 A0A096LNT2 108 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF503-AS2A6NEH8 195 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 EFCAB9A8MZ26 197 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 VWC2LB2RUY7 222 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 IGHMP01871 453 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF23P17027 643 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 TNFRSF1BP20333 461 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 GIFP27352 417 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 APLNRP35414 380 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 AQP2P41181 271 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF133P52736 654 aaPredicted RBP7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 RPL27P61353 136 aaKnown RBP7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 PCBD1P61457 104 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 SF3A3Q12874 501 aaKnown RBP eCLIP7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 RAB39AQ14964 217 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 HIST3H3Q16695 136 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 NKPD1Q17RQ9 610 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 PCGF3Q3KNV8 242 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 FAM209AQ5JX71 171 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 THEM4Q5T1C6 240 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 RGS7BPQ6MZT1 257 aaPredicted RBP7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF730Q6ZMV8 503 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 CBLL1Q75N03 491 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 MYPOPQ86VE0 399 aaPredicted RBP7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 TSPYL5Q86VY4 417 aaPredicted RBP7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 LSRQ86X29 649 aaPredicted RBP7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 SKA3Q8IX90 412 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 SLC15A3Q8IY34 581 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 ALDH16A1Q8IZ83 802 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF786Q8N393 782 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 ANKS4BQ8N8V4 417 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 UBASH3BQ8TF42 649 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 ACOT11Q8WXI4 607 aaPredicted RBP7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 C11orf40Q8WZ69 217 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 HPS1Q92902 700 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 KCNK17Q96T54 332 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 MRPL13Q9BYD1 178 aaKnown RBP7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 SHARPINQ9H0F6 387 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 SIAEQ9HAT2 523 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 SPAG4Q9NPE6 437 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 C20orf141Q9NUB4 165 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 CMTM6Q9NX76 183 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 NDE1Q9NXR1 346 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 SLCO1C1Q9NYB5 712 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 REV1Q9UBZ9 1251 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 A4GNTQ9UNA3 340 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 SAMD4AQ9UPU9 718 aaKnown RBP7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 ALPK2Q86TB3 2170 aa7.84□□□□□ -1.15
SNORD88A-201ENST00000408314 NME4O00746 187 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 XKRYO14609 159 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 AHCYL1O43865 530 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 LMX1BO60663 402 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 SHOX2O60902 331 aaPredicted RBP7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 TRMUO75648 421 aaKnown RBP7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 STAMBPO95630 424 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 SERPINA1P01009 418 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 ADRA2AP08913 450 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 TSPAN19P0C672 248 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 FAM157CP0CG43 387 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 ZNF16P17020 682 aaPredicted RBP7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 ITGA2P17301 1181 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 GSK3BP49841 420 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 KLF3P57682 345 aaPredicted RBP7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 MRPS11P82912 194 aaKnown RBP7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 TEKQ02763 1124 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 PRKCDQ05655 676 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 TOP3AQ13472 1001 aaPredicted RBP7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 KRT72Q14CN4 511 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 FXNQ16595 210 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 ARMC4Q5T2S8 1044 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 LRFN4Q6PJG9 635 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 ARL9Q6T311 187 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 CPLX4Q7Z7G2 160 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 OAFQ86UD1 273 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 SYT14Q8NB59 555 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 FAM156AQ8NDB6 213 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 ZNF519Q8TB69 540 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 MS4A3Q96HJ5 214 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 HSH2DQ96JZ2 352 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 ZNF75AQ96N20 296 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 ZNF347Q96SE7 839 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 SH3GL3Q99963 347 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms