RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 GK3PQ14409 553 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 THEM4Q5T1C6 240 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 C10orf128Q5T292 105 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 C1QTNF12Q5T7M4 302 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 GPR139Q6DWJ6 353 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 ADAM5Q6NVV9 412 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 SLC25A47Q6Q0C1 308 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 CDH24Q86UP0 819 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 MDP1Q86V88 176 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 SKA3Q8IX90 412 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 HS3ST5Q8IZT8 346 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 SLC22A24Q8N4F4 322 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 KBTBD8Q8NFY9 601 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 LILRB1Q8NHL6 650 aaPredicted RBP12.71□□□□□ -0.37
CDPF1-203ENST00000404583 NEUROG1Q92886 237 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 ERMAPQ96PL5 475 aaPredicted RBP12.71□□□□□ -0.37
CDPF1-203ENST00000404583 FEVQ99581 238 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 SH3GL3Q99963 347 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 NIPSNAP1Q9BPW8 284 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 IFT27Q9BW83 186 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 DGCR6LQ9BY27 220 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 TMEM38BQ9NVV0 291 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 ZNF224Q9NZL3 707 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 PDP1Q9P0J1 537 aaPredicted RBP12.71□□□□□ -0.37
CDPF1-203ENST00000404583 MGAT4BQ9UQ53 548 aa12.71□□□□□ -0.37
CDPF1-203ENST00000404583 IGHV1-18A0A0C4DH31 117 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 SLC22A23A1A5C7 686 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 IMPA2O14732 288 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 IGFBP1P08833 259 aaPredicted RBP12.71□□□□□ -0.38
CDPF1-203ENST00000404583 PATE4P0C8F1 98 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 OR8G3PP0DMU2 310 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 CD79AP11912 226 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 PRKACGP22612 351 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 CDAP32320 146 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 PTCHD4Q6ZW05 846 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 CCDC36Q8IYA8 594 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 FGFBP3Q8TAT2 258 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 FNDC8Q8TC99 324 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 AKAP1Q92667 903 aaKnown RBP eCLIP12.71□□□□□ -0.38
CDPF1-203ENST00000404583 DUS3LQ96G46 650 aaKnown RBP12.71□□□□□ -0.38
CDPF1-203ENST00000404583 SLC38A2Q96QD8 506 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 PLA2G12AQ9BZM1 189 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 SMURF2Q9HAU4 748 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 NTN4Q9HB63 628 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 NOX3Q9HBY0 568 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 ARMC1Q9NVT9 282 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 B3GNT2Q9NY97 397 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 IL20Q9NYY1 176 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 ST6GALNAC2Q9UJ37 374 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 PLEKHA6Q9Y2H5 1048 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 UGT2A1Q9Y4X1 527 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 AP4S1Q9Y587 144 aa12.71□□□□□ -0.38
CDPF1-203ENST00000404583 PLCE1Q9P212 2302 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 PRSS37A4D1T9 235 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 SHISA9B4DS77 424 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 DEAF1O75398 565 aaPredicted RBP12.7□□□□□ -0.38
CDPF1-203ENST00000404583 TXNDC12O95881 172 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 IGKV3-15P01624 115 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 CELA3BP08861 270 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 NR2C1P13056 603 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 CBR1P16152 277 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 PAX7P23759 505 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 CDKN2AP42771 156 aaKnown RBP12.7□□□□□ -0.38
CDPF1-203ENST00000404583 ETFDHQ16134 617 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 CLEC12AQ5QGZ9 265 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 SLC22A25Q6T423 547 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 PAMR1Q6UXH9 720 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 RASSF6Q6ZTQ3 369 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 LRRC18Q8N456 261 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 OR8D4Q8NGM9 314 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 SEC61A2Q9H9S3 476 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 CRNNQ9UBG3 495 aaPredicted RBP12.7□□□□□ -0.38
CDPF1-203ENST00000404583 CDH10Q9Y6N8 788 aa12.7□□□□□ -0.38
CDPF1-203ENST00000404583 RTTNQ86VV8 2226 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 ARRDC5A6NEK1 342 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 HS3ST1O14792 307 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 ARPC3O15145 178 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 FARS2O95363 451 aaKnown RBP12.69□□□□□ -0.38
CDPF1-203ENST00000404583 SOX14O95416 240 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 IGLV1-44P01699 117 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 TP53P04637 393 aaPredicted RBP12.69□□□□□ -0.38
CDPF1-203ENST00000404583 CECR9P0C854 216 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 APEHP13798 732 aaKnown RBP12.69□□□□□ -0.38
CDPF1-203ENST00000404583 HIST1H1CP16403 213 aaKnown RBP12.69□□□□□ -0.38
CDPF1-203ENST00000404583 GSTM3P21266 225 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 NOS3P29474 1203 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 IDH3GP51553 393 aaPredicted RBP12.69□□□□□ -0.38
CDPF1-203ENST00000404583 RAB1AP62820 205 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 NPRL3Q12980 569 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 KPNB1Q14974 876 aaKnown RBP12.69□□□□□ -0.38
CDPF1-203ENST00000404583 SGCAQ16586 387 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 GSG1Q2KHT4 349 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 ZNF672Q499Z4 452 aaPredicted RBP12.69□□□□□ -0.38
CDPF1-203ENST00000404583 SLC35F1Q5T1Q4 408 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 RPL13AP3Q6NVV1 102 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 MYPOPQ86VE0 399 aaPredicted RBP12.69□□□□□ -0.38
CDPF1-203ENST00000404583 FAM169BQ8N8A8 192 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 OR52L1Q8NGH7 329 aa12.69□□□□□ -0.38
CDPF1-203ENST00000404583 NANOS1Q8WY41 292 aaKnown RBP12.69□□□□□ -0.38
CDPF1-203ENST00000404583 NABP1Q96AH0 204 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms