RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 KLHL21Q9UJP4 597 aa25.74■■□□□ 1.71
USP42-202ENST00000404008 ANKHD1Q8IWZ3 2542 aaKnown RBP25.73■■□□□ 1.71
USP42-202ENST00000404008 TUBAL3A6NHL2 446 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 OR5H1A6NKK0 313 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 RENP00797 406 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 ZNF84P51523 738 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 SLC34A1Q06495 639 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 NPRL3Q12980 569 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 MEX3BQ6ZN04 569 aaKnown RBP25.73■■□□□ 1.71
USP42-202ENST00000404008 C22orf34Q6ZV56 151 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 C17orf78Q8N4C9 275 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 LINC01560Q8TB33 94 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 NSMAFQ92636 917 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 BCL2L2Q92843 193 aaPredicted RBP25.73■■□□□ 1.71
USP42-202ENST00000404008 WFIKKN1Q96NZ8 548 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 DDOQ99489 341 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 FOXB1Q99853 325 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 SPOCK3Q9BQ16 436 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 RIBC2Q9H4K1 309 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 CMC2Q9NRP2 79 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 NDRG3Q9UGV2 375 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 UGT2A1Q9Y4X1 527 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 PTPN13Q12923 2485 aa25.73■■□□□ 1.71
USP42-202ENST00000404008 OR6C68A6NDL8 312 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 ZAR1LA6NP61 321 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 SEC14L2O76054 403 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 IFNGP01579 166 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 CTLA4P16410 223 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 POLR2IP36954 125 aaKnown RBP25.72■■□□□ 1.71
USP42-202ENST00000404008 RAD23AP54725 363 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 LRRC36Q1X8D7 754 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 HIKESHIQ53FT3 197 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 TIMM23BQ5SRD1 257 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 P2RY8Q86VZ1 359 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 SLC37A3Q8NCC5 494 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 NUAK2Q9H093 628 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 TMEM38BQ9NVV0 291 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 CRYBG3Q68DQ2 2970 aa25.72■■□□□ 1.71
USP42-202ENST00000404008 SH3D21A4FU49 640 aa25.71■■□□□ 1.71
USP42-202ENST00000404008 RIIAD1A6NNX1 92 aa25.71■■□□□ 1.71
USP42-202ENST00000404008 HMGN1P05114 100 aa25.71■■□□□ 1.71
USP42-202ENST00000404008 KIR2DL3P43628 341 aa25.71■■□□□ 1.71
USP42-202ENST00000404008 RIPK1Q13546 671 aa25.71■■□□□ 1.71
USP42-202ENST00000404008 OGFRL1Q5TC84 451 aaPredicted RBP25.71■■□□□ 1.71
USP42-202ENST00000404008 SP5Q6BEB4 398 aaPredicted RBP25.71■■□□□ 1.71
USP42-202ENST00000404008 MED18Q9BUE0 208 aa25.71■■□□□ 1.71
USP42-202ENST00000404008 SLC17A5Q9NRA2 495 aa25.71■■□□□ 1.71
USP42-202ENST00000404008 A0A096LPE4 126 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 A0A1W2PPZ6 126 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 SURF4O15260 269 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 SLC16A7O60669 478 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 B4GALT1P15291 398 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 ZNF3P17036 446 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 CRMP1Q14194 572 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 TBRG1Q3YBR2 411 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 SLX4IPQ5VYV7 408 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 ZNF813Q6ZN06 617 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 CYB561A3Q8NBI2 242 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 HSD17B8Q92506 261 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 TSSK2Q96PF2 358 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 TEX12Q9BXU0 123 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 FN3KQ9H479 309 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 RPRD1BQ9NQG5 326 aaKnown RBP25.7■■□□□ 1.71
USP42-202ENST00000404008 C8orf4Q9NR00 106 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 CRIM1Q9NZV1 1036 aa25.7■■□□□ 1.71
USP42-202ENST00000404008 DCTN6O00399 190 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 THBDP07204 575 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 CRABP1P29762 137 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 TAB1Q15750 504 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 ETFDHQ16134 617 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 KLHL24Q6TFL4 600 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 DACH2Q96NX9 599 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 ZIK1Q3SY52 487 aaPredicted RBP25.69■■□□□ 1.7
USP42-202ENST00000404008 NRN1LQ496H8 165 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 DNM1P34Q6PK57 102 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 FOXL2NBQ6ZUU3 175 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 ZBTB46Q86UZ6 589 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 OR6V1Q8N148 313 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 SLC22A24Q8N4F4 322 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 PACRGLQ8N7B6 248 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 WDR31Q8NA23 367 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 MBOAT4Q96T53 435 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 TOR3AQ9H497 397 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 RERGLQ9H628 205 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 SLC24A3Q9HC58 644 aa25.69■■□□□ 1.7
USP42-202ENST00000404008 DCHS2Q6V1P9 2916 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 IGLV1-36A0A0B4J1U3 117 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 KHDRBS3O75525 346 aaKnown RBP25.68■■□□□ 1.7
USP42-202ENST00000404008 COL8A1P27658 744 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 HOXC12P31275 282 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 CDAP32320 146 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 MRPS34P82930 218 aaKnown RBP25.68■■□□□ 1.7
USP42-202ENST00000404008 DBPQ10586 325 aaPredicted RBP25.68■■□□□ 1.7
USP42-202ENST00000404008 C12orf73Q69YU5 71 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 GALNT4Q8N4A0 578 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 OR52N5Q8NH56 324 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 HTRA1Q92743 480 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 NABP1Q96AH0 204 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 ZC3HAV1LQ96H79 300 aaKnown RBP25.68■■□□□ 1.7
USP42-202ENST00000404008 SLC38A2Q96QD8 506 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms