RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 KEAP1Q14145 624 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 TTC23Q5W5X9 447 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 SLC25A47Q6Q0C1 308 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 OR6V1Q8N148 313 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 HCAR1Q9BXC0 346 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 HINT3Q9NQE9 182 aaKnown RBP29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 IMPAD1Q9NX62 359 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 ITGA5P08648 1049 aa29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 MPGP29372 298 aa29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 CAPGP40121 348 aa29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 ASCL1P50553 236 aa29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 ZNF133P52736 654 aaPredicted RBP29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 C6orf52Q5T4I8 152 aa29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 PLBD1Q6P4A8 553 aa29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 CXorf67Q86X51 503 aaPredicted RBP29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 CPOQ8IVL8 374 aa29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 PTP4A1Q93096 173 aa29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 KCNJ16Q9NPI9 418 aa29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 SPTBN1Q01082 2364 aaKnown RBP29.29■■■□□ 2.28
CSNK1E-204ENST00000403904 PRR23D1E9PI22 279 aaPredicted RBP29.28■■■□□ 2.28
CSNK1E-204ENST00000403904 LYZL6O75951 148 aa29.28■■■□□ 2.28
CSNK1E-204ENST00000403904 RNF224P0DH78 156 aa29.28■■■□□ 2.28
CSNK1E-204ENST00000403904 PRR23D2P0DMB1 279 aaPredicted RBP29.28■■■□□ 2.28
CSNK1E-204ENST00000403904 CLUP10909 449 aa29.28■■■□□ 2.28
CSNK1E-204ENST00000403904 C10orf128Q5T292 105 aa29.28■■■□□ 2.28
CSNK1E-204ENST00000403904 TFAP2CQ92754 450 aa29.28■■■□□ 2.28
CSNK1E-204ENST00000403904 NMNAT2Q9BZQ4 307 aa29.28■■■□□ 2.28
CSNK1E-204ENST00000403904 GALNT8Q9NY28 637 aa29.28■■■□□ 2.28
CSNK1E-204ENST00000403904 CACNA1CQ13936 2221 aa29.28■■■□□ 2.28
CSNK1E-204ENST00000403904 H0YAE9 185 aa29.27■■■□□ 2.28
CSNK1E-204ENST00000403904 CLDN14O95500 239 aa29.27■■■□□ 2.28
CSNK1E-204ENST00000403904 GYPBP06028 91 aa29.27■■■□□ 2.28
CSNK1E-204ENST00000403904 PAICSP22234 425 aaKnown RBP29.27■■■□□ 2.28
CSNK1E-204ENST00000403904 FAM27E3Q08E93 113 aa29.27■■■□□ 2.28
CSNK1E-204ENST00000403904 P2RY6Q15077 328 aa29.27■■■□□ 2.28
CSNK1E-204ENST00000403904 TSC22D1Q15714 1073 aa29.27■■■□□ 2.28
CSNK1E-204ENST00000403904 TMEM163Q8TC26 289 aa29.27■■■□□ 2.28
CSNK1E-204ENST00000403904 TAS2R16Q9NYV7 291 aa29.27■■■□□ 2.28
CSNK1E-204ENST00000403904 B9D1Q9UPM9 204 aa29.27■■■□□ 2.28
CSNK1E-204ENST00000403904 WIPF3A6NGB9 483 aa29.26■■■□□ 2.28
CSNK1E-204ENST00000403904 COX5AP20674 150 aa29.26■■■□□ 2.28
CSNK1E-204ENST00000403904 CRABP1P29762 137 aa29.26■■■□□ 2.28
CSNK1E-204ENST00000403904 CXXC5Q7LFL8 322 aaKnown RBP29.26■■■□□ 2.28
CSNK1E-204ENST00000403904 BCDIN3DQ7Z5W3 292 aaKnown RBP29.26■■■□□ 2.28
CSNK1E-204ENST00000403904 FOXN4Q96NZ1 517 aa29.26■■■□□ 2.28
CSNK1E-204ENST00000403904 ZNF226Q9NYT6 803 aa29.26■■■□□ 2.28
CSNK1E-204ENST00000403904 FKBP7Q9Y680 259 aa29.26■■■□□ 2.28
CSNK1E-204ENST00000403904 TENM4Q6N022 2769 aa29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 FAM171A2A8MVW0 826 aa29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 SEC14L2O76054 403 aa29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 GNAO1P09471 354 aa29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 ARF1P84077 181 aaKnown RBP29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 STAC2Q6ZMT1 411 aa29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 ZBTB46Q86UZ6 589 aa29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 ZNF433Q8N7K0 673 aaPredicted RBP29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 BBS1Q8NFJ9 593 aa29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 OR51L1Q8NGJ5 315 aa29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 OR8J1Q8NGP2 316 aa29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 ZNRF4Q8WWF5 429 aa29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 ELOVL5Q9NYP7 299 aa29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 COA3Q9Y2R0 106 aaPredicted RBP29.26■■■□□ 2.27
CSNK1E-204ENST00000403904 IGLV1-36A0A0B4J1U3 117 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 ZNF99A8MXY4 864 aaPredicted RBP29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 KHDRBS3O75525 346 aaKnown RBP29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 SPI1P17947 270 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 CDAP32320 146 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 PYCR1P32322 319 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 CD79BP40259 229 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 ZNF84P51523 738 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 SLC25A1P53007 311 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 SFRP5Q5T4F7 317 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 DNM1P34Q6PK57 102 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 DEPDC4Q8N2C3 294 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 OR2T4Q8NH00 348 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 HTRA1Q92743 480 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 MUS81Q96NY9 551 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 APOL4Q9BPW4 351 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 OR51V1Q9H2C8 321 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 RASSF1Q9NS23 344 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 AASSQ9UDR5 926 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 UGT2A1Q9Y4X1 527 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 COL12A1Q99715 3063 aa29.25■■■□□ 2.27
CSNK1E-204ENST00000403904 FBXL19-AS1Q494R0 122 aa29.24■■■□□ 2.27
CSNK1E-204ENST00000403904 ZNF691Q5VV52 312 aa29.24■■■□□ 2.27
CSNK1E-204ENST00000403904 ENTHD1Q8IYW4 607 aa29.24■■■□□ 2.27
CSNK1E-204ENST00000403904 FAM26EQ8N5C1 309 aa29.24■■■□□ 2.27
CSNK1E-204ENST00000403904 PROKR2Q8NFJ6 384 aa29.24■■■□□ 2.27
CSNK1E-204ENST00000403904 TRUB1Q8WWH5 349 aaKnown RBP29.24■■■□□ 2.27
CSNK1E-204ENST00000403904 FOXB1Q99853 325 aa29.24■■■□□ 2.27
CSNK1E-204ENST00000403904 CIB4A0PJX0 185 aa29.23■■■□□ 2.27
CSNK1E-204ENST00000403904 RAD51DO75771 328 aa29.23■■■□□ 2.27
CSNK1E-204ENST00000403904 CENPAP49450 140 aa29.23■■■□□ 2.27
CSNK1E-204ENST00000403904 SEC61A2Q9H9S3 476 aa29.23■■■□□ 2.27
CSNK1E-204ENST00000403904 HELZ2Q9BYK8 2649 aaKnown RBP29.23■■■□□ 2.27
CSNK1E-204ENST00000403904 A0A1W2PPL8 197 aa29.22■■■□□ 2.27
CSNK1E-204ENST00000403904 GPANK1O95872 356 aa29.22■■■□□ 2.27
CSNK1E-204ENST00000403904 HSPA13P48723 471 aa29.22■■■□□ 2.27
CSNK1E-204ENST00000403904 TGFBR3Q03167 851 aa29.22■■■□□ 2.27
CSNK1E-204ENST00000403904 STK11Q15831 433 aa29.22■■■□□ 2.27
CSNK1E-204ENST00000403904 KLHL12Q53G59 568 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms