RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 FGF12P61328 243 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 BTG1P62324 171 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 EGR3Q06889 387 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 HNRNPA0Q13151 305 aaKnown RBP7.73□□□□□ -1.17
NUP43-204ENST00000403890 PTGR1Q14914 329 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 HERPUD1Q15011 391 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 ZMYND11Q15326 602 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 WHAMMP3Q1A5X7 153 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 TBC1D28Q2M2D7 210 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 SPRNQ5BIV9 151 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 GDPGP1Q6ZNW5 385 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 RNF165Q6ZSG1 346 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 ZCCHC23Q6ZST2 131 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 H1FNTQ75WM6 255 aaPredicted RBP7.73□□□□□ -1.17
NUP43-204ENST00000403890 KRTCAP2Q8N6L1 136 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 ZNF283Q8N7M2 679 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 OR1J1Q8NGS3 322 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 OR6N1Q8NGY5 312 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 PNPT1Q8TCS8 783 aaKnown RBP7.73□□□□□ -1.17
NUP43-204ENST00000403890 DACT3Q96B18 629 aaPredicted RBP7.73□□□□□ -1.17
NUP43-204ENST00000403890 PHF21AQ96BD5 680 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 EMC6Q9BV81 110 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 PTDSS2Q9BVG9 487 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 KRTAP9-9Q9BYP9 154 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 KRTAP9-4Q9BYQ2 154 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 MTHFD2LQ9H903 347 aaPredicted RBP7.73□□□□□ -1.17
NUP43-204ENST00000403890 SRA1Q9HD15 236 aaKnown RBP7.73□□□□□ -1.17
NUP43-204ENST00000403890 CYSLTR2Q9NS75 346 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 RLIMQ9NVW2 624 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 FIS1Q9Y3D6 152 aa7.73□□□□□ -1.17
NUP43-204ENST00000403890 BIRC6Q9NR09 4857 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 CEACAM18A8MTB9 384 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 G3V2L1 256 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 OR2T1O43869 369 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 TSPAN9O75954 239 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 IGHV4-59P01825 116 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 CD55P08174 381 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 PRPS1L1P21108 318 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 UQCRC2P22695 453 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 ARRB2P32121 409 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 CRHR1P34998 444 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 MDH2P40926 338 aaKnown RBP7.72□□□□□ -1.17
NUP43-204ENST00000403890 IER3P46695 156 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 GNB2P62879 340 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 TNFAIP6P98066 277 aaPredicted RBP7.72□□□□□ -1.17
NUP43-204ENST00000403890 PGS1Q32NB8 556 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 CCDC153Q494R4 210 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 DEFB121Q5J5C9 76 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 ZNF774Q6NX45 483 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 TMEM53Q6P2H8 277 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 ZYG11AQ6WRX3 759 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 TRMT10CQ7L0Y3 403 aaKnown RBP7.72□□□□□ -1.17
NUP43-204ENST00000403890 UEVLDQ8IX04 471 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 RIMKLAQ8IXN7 391 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 CLECL1Q8IZS7 167 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 MUC20Q8N307 709 aaPredicted RBP7.72□□□□□ -1.17
NUP43-204ENST00000403890 MIER2Q8N344 545 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 SLC22A24Q8N4F4 322 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 VPS37AQ8NEZ2 397 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 MARS2Q96GW9 593 aaKnown RBP7.72□□□□□ -1.17
NUP43-204ENST00000403890 PLEKHA8Q96JA3 519 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 TRNT1Q96Q11 434 aaKnown RBP7.72□□□□□ -1.17
NUP43-204ENST00000403890 NUDT16L1Q9BRJ7 211 aaKnown RBP7.72□□□□□ -1.17
NUP43-204ENST00000403890 SLC19A3Q9BZV2 496 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 MRPL18Q9H0U6 180 aaKnown RBP7.72□□□□□ -1.17
NUP43-204ENST00000403890 SLC38A1Q9H2H9 487 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 DPAGT1Q9H3H5 408 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 RNF121Q9H920 327 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 TMEM165Q9HC07 324 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 A4GALTQ9NPC4 353 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 KIF17Q9P2E2 1029 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 CGGBP1Q9UFW8 167 aaPredicted RBP7.72□□□□□ -1.17
NUP43-204ENST00000403890 DNAJC15Q9Y5T4 150 aa7.72□□□□□ -1.17
NUP43-204ENST00000403890 IQCMA0A1B0GVH7 501 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 CDHR4A6H8M9 788 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 ZNF726A6NNF4 738 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 MS4A18H0YCH9 400 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 K7EIL1 84 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 NPHS1O60500 1241 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 FZD7O75084 574 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 PEX11AO75192 247 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 GLRA3O75311 464 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 PPP1R3DO95685 299 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 DBIP07108 87 aaKnown RBP7.71□□□□□ -1.18
NUP43-204ENST00000403890 SFTPBP07988 381 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 ABHD2P08910 425 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 HLA-DOBP13765 273 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 NCF2P19878 526 aaPredicted RBP7.71□□□□□ -1.18
NUP43-204ENST00000403890 FSTP19883 344 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 RPS4Y1P22090 263 aaKnown RBP7.71□□□□□ -1.18
NUP43-204ENST00000403890 MPV17P39210 176 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 PCBP3P57721 371 aaKnown RBP7.71□□□□□ -1.18
NUP43-204ENST00000403890 DNAJB13P59910 316 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 PLP2Q04941 152 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 EGR4Q05215 589 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 MS4A18Q3C1V0 323 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 XKR7Q5GH72 579 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 ZMAT1Q5H9K5 638 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 THEM4Q5T1C6 240 aa7.71□□□□□ -1.18
NUP43-204ENST00000403890 FOXB2Q5VYV0 432 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms