RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 C9orf16Q9BUW7 83 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RBM4Q9BWF3 364 aaKnown RBP10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ACTR6Q9GZN1 396 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR10A4Q9H209 315 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SYT4Q9H2B2 425 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 FN3KQ9H479 309 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 DCLRE1BQ9H816 532 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RNPEPL1Q9HAU8 725 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 BAHCC1Q9P281 2608 aa10.88□□□□□ -0.67
HLA-DQB1-203ENST00000399082 IGLV1-36A0A0B4J1U3 117 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR5H1A6NKK0 313 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZNF99A8MXY4 864 aaPredicted RBP10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 MGRN1O60291 552 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 KRT33AO76009 404 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SCG5P05408 212 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 B4GALT1P15291 398 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 IL32P24001 234 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NOS3P29474 1203 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 GRK5P34947 590 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ESRRGP62508 458 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CRMP1Q14194 572 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 PTGES3Q15185 160 aaKnown RBP10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TRIP10Q15642 601 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TAB1Q15750 504 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OGFRL1Q5TC84 451 aaPredicted RBP10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLX4IPQ5VYV7 408 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLC27A4Q6P1M0 643 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 LEG1Q6P5S2 330 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 MEX3BQ6ZN04 569 aaKnown RBP10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ABHD12BQ7Z5M8 362 aaPredicted RBP10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CYB561A3Q8NBI2 242 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 STEAP2Q8NFT2 490 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR52E2Q8NGJ4 325 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZNRF4Q8WWF5 429 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SNX18Q96RF0 628 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 FOXB1Q99853 325 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 HCAR1Q9BXC0 346 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NMNAT2Q9BZQ4 307 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NUAK2Q9H093 628 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 B3GAT2Q9NPZ5 323 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLC17A5Q9NRA2 495 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CMC2Q9NRP2 79 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZNF224Q9NZL3 707 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CRIM1Q9NZV1 1036 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 BAIAP2Q9UQB8 552 aa10.87□□□□□ -0.67
HLA-DQB1-203ENST00000399082 PKDREJQ9NTG1 2253 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 A0A096LPE4 126 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 A0A1W2PPZ6 126 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 A0A1W2PR80 420 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CIB4A0PJX0 185 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SH3D21A4FU49 640 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 M0R129 80 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 XKRYO14609 159 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SURF4O15260 269 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SIAH2O43255 324 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 AHCYL1O43865 530 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 GPANK1O95872 356 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CDAP32320 146 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SH3BGRP55822 239 aaPredicted RBP10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NPRL3Q12980 569 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 LRRC36Q1X8D7 754 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TBRG1Q3YBR2 411 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 THEM4Q5T1C6 240 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 C12orf73Q69YU5 71 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SP5Q6BEB4 398 aaPredicted RBP10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ANKRD16Q6P6B7 361 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 KLHL24Q6TFL4 600 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZBTB49Q6ZSB9 765 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR6V1Q8N148 313 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 FGFBP3Q8TAT2 258 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NRG4Q8WWG1 115 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NSMAFQ92636 917 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 EME1Q96AY2 570 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 LRRC46Q96FV0 321 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 FOXN4Q96NZ1 517 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SPOCK3Q9BQ16 436 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 HDHD5Q9BXW7 423 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NOX3Q9HBY0 568 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TMEM38BQ9NVV0 291 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 NPAP1Q9NZP6 1156 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RRP15Q9Y3B9 282 aaKnown RBP10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLC25A15Q9Y619 301 aa10.86□□□□□ -0.67
HLA-DQB1-203ENST00000399082 HECTD1Q9ULT8 2610 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLC16A7O60669 478 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SNAP29O95721 258 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 GAAP10253 952 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 CLUP10909 449 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 LOXP28300 417 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TUBA1BP68363 451 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TUBA4AP68366 448 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 MRPS34P82930 218 aaKnown RBP10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 EFNB1P98172 346 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TGFBR3Q03167 851 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLC34A1Q06495 639 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZIK1Q3SY52 487 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TIMM23BQ5SRD1 257 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OTPQ5XKR4 325 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR7E24Q6IFN5 339 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZNF813Q6ZN06 617 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TUBA1AQ71U36 451 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms