RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ZFHX4Q86UP3 3567 aa17.32■□□□□ 0.36
PDLIM2-204ENST00000397760 TRAV17A0A0B4J275 112 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 RNF13O43567 381 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 SLC2A10O95528 541 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 HPNP05981 417 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 NOS3P29474 1203 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 MAGEA5P43359 124 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 MAP2K3P46734 347 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 C19orf57Q0VDD7 668 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 SF3B4Q15427 424 aaKnown RBP eCLIP17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 Q8N402 240 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 ZADH2Q8N4Q0 377 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 LRRC75AQ8NAA5 344 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 BBS1Q8NFJ9 593 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 SMPDL3BQ92485 455 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 GPX7Q96SL4 187 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 HDHD5Q9BXW7 423 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 NDEL1Q9GZM8 345 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 NRIP3Q9NQ35 241 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 TRIM36Q9NQ86 728 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 MRPL39Q9NYK5 338 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 APC2O95996 2303 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 F13BP05160 661 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 CTXN1P60606 82 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 PPIAP62937 165 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 ERVK-25P63136 954 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 HYAL4Q2M3T9 481 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 TBRG1Q3YBR2 411 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 PLET1Q6UQ28 207 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 TMEM91Q6ZNR0 172 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 ZFP41Q8N8Y5 198 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 KCNJ15Q99712 375 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 TRAF4Q9BUZ4 470 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 ALKBH4Q9NXW9 302 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 HAO2Q9NYQ3 351 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 ADAM18Q9Y3Q7 739 aa17.31■□□□□ 0.36
PDLIM2-204ENST00000397760 C12orf71A8MTZ7 269 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 PLPP3O14495 311 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 OR6A2O95222 327 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 CELA3AP09093 270 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 KIR2DL3P43628 341 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 NKX2-5P52952 324 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 PLBD1Q6P4A8 553 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 ARHGAP11AQ6P4F7 1023 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 IGFL3Q6UXB1 125 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 H1FNTQ75WM6 255 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 TPRA1Q86W33 373 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 KLBQ86Z14 1044 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 OR51G2Q8NGK0 314 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 ALG8Q9BVK2 526 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 TMEM165Q9HC07 324 aa17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 DDX28Q9NUL7 540 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-204ENST00000397760 CFAP47Q6ZTR5 3102 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 GJE1A6NN92 205 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 C11orf98E9PRG8 122 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 SULT2B1O00204 365 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 ARPC3O15145 178 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 HPGDSO60760 199 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 CD14P08571 375 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 AHCYP23526 432 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 UCNP55089 124 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 TMPRSS3P57727 454 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 POU4F2Q12837 409 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 TMPPEQ6ZT21 453 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 MMP28Q9H239 520 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 CHST11Q9NPF2 352 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 KLHL21Q9UJP4 597 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 SLC6A5Q9Y345 797 aa17.29■□□□□ 0.36
PDLIM2-204ENST00000397760 PRR23D1E9PI22 279 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 MKRN2OSH3BPM6 223 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 ACOT7O00154 380 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 PLPP2O43688 288 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 FZD7O75084 574 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 AKR7A3O95154 331 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 MT-ND5P03915 603 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 PRR23D2P0DMB1 279 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 APEX1P27695 318 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 DIO1P49895 249 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 GFRA1P56159 465 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 ZNF362Q5T0B9 420 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 HBMQ6B0K9 141 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 LIX1LQ8IVB5 337 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 KISS1RQ969F8 398 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 MIB2Q96AX9 1013 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 RBMX2Q9Y388 322 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 MPDZO75970 2070 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 LOC400499M0QZD8 3231 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 DAPL1A0PJW8 107 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 RIIAD1A6NNX1 92 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 C1QTNF9BB2RNN3 333 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 LINC01387J3KSC0 135 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 TFECO14948 347 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 LRRTM2O43300 516 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 YES1P07947 543 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 C1QTNF9P0C862 333 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 HIST1H1CP16403 213 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 STARP49675 285 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 ACTC1P68032 377 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 ACTA1P68133 377 aa17.28■□□□□ 0.36
PDLIM2-204ENST00000397760 PUDPQ08623 228 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms