RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FOSL1P15407 271 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 LIMS1P48059 325 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 PTH2RP49190 550 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 DAPP51397 102 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 CXCR4P61073 352 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 CSNK2BP67870 215 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 HIKESHIQ53FT3 197 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 ZNF691Q5VV52 312 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 SLC22A25Q6T423 547 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 NHLRC1Q6VVB1 395 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 LINGO2Q7L985 606 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 CCDC36Q8IYA8 594 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 C20orf196Q8IYI0 205 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 WFDC11Q8NEX6 87 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 OR4C15Q8NGM1 316 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 HDAC2Q92769 488 aaKnown RBP12.73□□□□□ -0.37
SEC13-208ENST00000397109 NEUROG1Q92886 237 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 PERPQ96FX8 193 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 C1QTNF6Q9BXI9 259 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 GRIP2Q9C0E4 1043 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 GPR35Q9HC97 309 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 KRT84Q9NSB2 600 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 KIF17Q9P2E2 1029 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 POU2F3Q9UKI9 436 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 ARPC4-TTLL3A0A0A6YYG9 625 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 HTR3EA5X5Y0 456 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 E9PQ18 207 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 KPNA4O00629 521 aaPredicted RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 GADD45GO95257 159 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 TFAP2AP05549 437 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 PRKACGP22612 351 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 TTKP33981 857 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 YAP1P46937 504 aaKnown RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 TRAM2Q15035 370 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 C3orf36Q3SXR2 165 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 ZIK1Q3SY52 487 aaPredicted RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 Q5PR19 223 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 KRTAP1-3Q8IUG1 177 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 NKAIN4Q8IVV8 208 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 ATG16L2Q8NAA4 619 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 FBLIM1Q8WUP2 373 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 TMEM239Q8WW34 195 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 TRMT61AQ96FX7 289 aaKnown RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 ADAD1Q96M93 576 aaKnown RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 MBOAT4Q96T53 435 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 APOL4Q9BPW4 351 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 FUZQ9BT04 418 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 EMC6Q9BV81 110 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 FNDC11Q9BVV2 318 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 GABARAPL3Q9BY60 117 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 ZNF556Q9HAH1 456 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 CRLF2Q9HC73 371 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 MEPEQ9NQ76 525 aaPredicted RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 MED29Q9NX70 200 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 POFUT2Q9Y2G5 429 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 PCDHGB5Q9Y5G0 923 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 FLNAP21333 2647 aaKnown RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 C11orf98E9PRG8 122 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 OVOL3O00110 214 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 RNF13O43567 381 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 MRPS14O60783 128 aaKnown RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 DIRAS1O95057 198 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 H1F0P07305 194 aaKnown RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 CCDC159P0C7I6 412 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 ASAH2BP0C7U1 165 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 FUT4P22083 530 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 GABARAPL2P60520 117 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 ISL1P61371 349 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 ARF1P84077 181 aaKnown RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 SPIBQ01892 262 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 CEACAM16Q2WEN9 425 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 AGAP6Q5VW22 663 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 CARD17Q5XLA6 110 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 SLC46A3Q7Z3Q1 461 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 NANOGNBQ7Z5D8 188 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 DTX2Q86UW9 622 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 HS3ST5Q8IZT8 346 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 ZNF786Q8N393 782 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 PARP8Q8N3A8 854 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 FAM169BQ8N8A8 192 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 OR6N1Q8NGY5 312 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 ZNF566Q969W8 418 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 GTPBP3Q969Y2 492 aaKnown RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 SGTBQ96EQ0 304 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 TXNDC15Q96J42 360 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 DHRS9Q9BPW9 319 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 TAS2R5Q9NYW4 299 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 NDRG4Q9ULP0 352 aaKnown RBP12.72□□□□□ -0.37
SEC13-208ENST00000397109 TMCC3Q9ULS5 477 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 MED31Q9Y3C7 131 aa12.72□□□□□ -0.37
SEC13-208ENST00000397109 ZNF99A8MXY4 864 aaPredicted RBP12.71□□□□□ -0.38
SEC13-208ENST00000397109 M0R3G1 203 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 SERPINI2O75830 405 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 OR7A10O76100 309 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 SOD3P08294 240 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 FUT1P19526 365 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 UGT2B15P54855 530 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 ATP5J2P56134 94 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 TEKQ02763 1124 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 NPRL3Q12980 569 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms