RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 PRR14Q9BWN1 585 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 PRDM7Q9NQW5 492 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 KCNE1BA0A087WTH5 132 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 LRP5LA4QPB2 252 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 PRRG2O14669 202 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 ARPC5O15511 151 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 PRAMEF4O60810 478 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 BLVRBP30043 206 aaPredicted RBP13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 VEGFCP49767 419 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 ADGRF3Q8IZF5 1079 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 ANKRD53Q8N9V6 530 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 OR51A2Q8NGJ7 313 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 COX14Q96I36 57 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 NKX3-1Q99801 234 aaPredicted RBP13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 PLA2G2FQ9BZM2 168 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 COQ3Q9NZJ6 369 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 GPR55Q9Y2T6 319 aaPredicted RBP13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 TIMM10BQ9Y5J6 103 aa13.2□□□□□ -0.3
PPARGC1B-203ENST00000394320 ICOSLGO75144 302 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 ACKR1Q16570 336 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 FAHD1Q6P587 224 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 B3GLCTQ6Y288 498 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 MEX3BQ6ZN04 569 aaKnown RBP13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 SIRT6Q8N6T7 355 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 OR2A14Q96R47 310 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 S1PR5Q9H228 398 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 TMEM165Q9HC07 324 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 MICAL3Q7RTP6 2002 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 TMEM82A0PJX8 343 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 TOR1AO14656 332 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 CALCBP10092 127 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 TPT1P13693 172 aaKnown RBP13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 GDNFP39905 211 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 CLDN6P56747 220 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 RNF4P78317 190 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 GK2Q14410 553 aaPredicted RBP13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 PRAMEF9Q5VWM5 478 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 Q6ZTK2 550 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 FAM3DQ96BQ1 224 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 MSI2Q96DH6 328 aaKnown RBP13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 OR5B12Q96R08 314 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 TXNIPQ9H3M7 391 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 TRAPPC2LQ9UL33 140 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 PCDHGA1Q9Y5H4 931 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 IMPA2O14732 288 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 CBR3O75828 277 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 TSPAN15O95858 294 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 MT-ND4P03905 459 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 SPI1P17947 270 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 ARR3P36575 388 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 EGR3Q06889 387 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 DMWDQ09019 674 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 FZD2Q14332 565 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 WDSUB1Q8N9V3 476 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 DRAXINQ8NBI3 349 aaPredicted RBP13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 WWTR1Q9GZV5 400 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 DUSP21Q9H596 190 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 SLC22A23A1A5C7 686 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 ARGFXA6NJG6 315 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 TOX3O15405 576 aaPredicted RBP13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 SULT1C4O75897 302 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 SRMP19623 302 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 EIF2S3P41091 472 aaKnown RBP13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 CLPPQ16740 277 aaPredicted RBP13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 TMEM215Q68D42 235 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 OR4N2Q8NGD1 307 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 SELENOIQ9C0D9 397 aa13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 HINT3Q9NQE9 182 aaKnown RBP13.19□□□□□ -0.3
PPARGC1B-203ENST00000394320 TNFSF15O95150 251 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 HLA-AP01891 365 aaKnown RBP13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 GABRA2P47869 451 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 CD163Q86VB7 1156 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 NAXDQ8IW45 347 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 PHC2Q8IXK0 858 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 SEMA6DQ8NFY4 1073 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 SMAP2Q8WU79 429 aaPredicted RBP13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 FGGYQ96C11 551 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 SLC25A21Q9BQT8 299 aaPredicted RBP13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 NAA50Q9GZZ1 169 aaKnown RBP13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 LRRC30A6NM36 301 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 FAM166BA8MTA8 275 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 MKRN2OSH3BPM6 223 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 RGS11O94810 467 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 EPHA1P21709 976 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 ARRB2P32121 409 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 MFGE8Q08431 387 aaPredicted RBP13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 GPR157Q5UAW9 335 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 LIPNQ5VXI9 398 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 CALHM3Q86XJ0 350 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 OR1N1Q8NGS0 311 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 KCNJ15Q99712 375 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 PRRX2Q99811 253 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 OR14J1Q9UGF5 321 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 SMCHD1A6NHR9 2005 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 NKX6-3A6NJ46 265 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 SELENOFO60613 162 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 CCL7P80098 99 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 BCL2A1Q16548 175 aa13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 NCCRP1Q6ZVX7 275 aaPredicted RBP13.18□□□□□ -0.3
PPARGC1B-203ENST00000394320 GAB3Q8WWW8 586 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms