RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 PRAMEF9Q5VWM5 478 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 ARIH2OSQ8N7S6 290 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 BEST4Q8NFU0 473 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 QDPRP09417 244 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 FOXB2Q5VYV0 432 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 PHYHIPQ92561 330 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 CMSS1Q9BQ75 279 aaKnown RBP15.12■□□□□ 0.01
SCN3B-202ENST00000392770 RHNO1Q9BSD3 238 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 PIGLQ9Y2B2 252 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 GPR171O14626 319 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 MUCL1Q96DR8 90 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 ITPKCQ96DU7 683 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 RAB3CQ96E17 227 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 S1PR5Q9H228 398 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 GPR55Q9Y2T6 319 aaPredicted RBP15.11■□□□□ 0.01
SCN3B-202ENST00000392770 TMEM221A6NGB7 291 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 GREM1O60565 184 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 UBL3O95164 117 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 TBXA2RP21731 343 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 IL13RA1P78552 427 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 PLA2G12AQ9BZM1 189 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 DEFB127Q9H1M4 99 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 TMEFF2Q9UIK5 374 aaPredicted RBP15.11■□□□□ 0.01
SCN3B-202ENST00000392770 TGFBR1P36897 503 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 MEX3BQ6ZN04 569 aaKnown RBP15.11■□□□□ 0.01
SCN3B-202ENST00000392770 OVCH1Q7RTY7 1134 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 ABI3BPQ7Z7G0 1075 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 IL1F10Q8WWZ1 152 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 ZBTB8AQ96BR9 441 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 SIRT5Q9NXA8 310 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 LRFN1Q9P244 771 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 LOC100289279A0A1B0GTE1 492 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 ATF4P18848 351 aaPredicted RBP15.11■□□□□ 0.01
SCN3B-202ENST00000392770 CYCSP99999 105 aaKnown RBP15.11■□□□□ 0.01
SCN3B-202ENST00000392770 GLYATL3Q5SZD4 288 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 LIPNQ5VXI9 398 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 SULF2Q8IWU5 870 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 OR4K15Q8NH41 348 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 FAM3DQ96BQ1 224 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 MRGPRX4Q96LA9 322 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 ZPBPQ9BS86 351 aa15.11■□□□□ 0.01
SCN3B-202ENST00000392770 TNFSF11O14788 317 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 MESP2Q0VG99 397 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 AGAP6Q5VW22 663 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 APH1AQ96BI3 265 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 ZNF486Q96H40 463 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-202ENST00000392770 AGAP4Q96P64 663 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 SELENOIQ9C0D9 397 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 CHST2Q9Y4C5 530 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 MICAL3Q7RTP6 2002 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 WISP3O95389 354 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-202ENST00000392770 SLC2A1P11166 492 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 ADH6P28332 368 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 ZNF93P35789 620 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-202ENST00000392770 TAS2R46P59540 309 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 CD300LFQ8TDQ1 290 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 OR14J1Q9UGF5 321 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 IGHV3-15A0A0B4J1V0 119 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 ANKUB1A6NFN9 424 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 ABHD16AO95870 558 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 LANCL3Q6ZV70 420 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 OR1J2Q8NGS2 313 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 VN1R1Q9GZP7 353 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 OSGIN1Q9UJX0 560 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 MIA3Q5JRA6 1907 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 PSME4Q14997 1843 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 PRSS37A4D1T9 235 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 MAGEB4O15481 346 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-202ENST00000392770 C21orf58P58505 322 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 FOXF1Q12946 379 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 CORO6Q6QEF8 472 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 C1orf210Q8IVY1 113 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 NKAIN3Q8N8D7 197 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 PPP1R35Q8TAP8 253 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 YIPF6Q96EC8 236 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 ELMOD3Q96FG2 381 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 OPALINQ96PE5 141 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 TSSK2Q96PF2 358 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 TAAR9Q96RI9 348 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 FSCN3Q9NQT6 498 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 TIMM8AO60220 97 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-202ENST00000392770 RFPL3O75679 317 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 NKX2-2O95096 273 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 THEM4Q5T1C6 240 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 KCNG3Q8TAE7 436 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 SLC22A11Q9NSA0 550 aa15.1■□□□□ 0.01
SCN3B-202ENST00000392770 MSR1P21757 451 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 ZMYND11Q15326 602 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 AGAP7PQ5VUJ5 663 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 VHLLQ6RSH7 139 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 ADGRE4PQ86SQ3 457 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 PIGTQ969N2 578 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 NUP50Q9UKX7 468 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 GAAP10253 952 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 C12orf45Q8N5I9 185 aaPredicted RBP15.09■□□□□ 0.01
SCN3B-202ENST00000392770 OR51D1Q8NGF3 324 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 PSMF1Q92530 271 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 SLAMF6Q96DU3 332 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 TXNDC15Q96J42 360 aa15.09■□□□□ 0.01
SCN3B-202ENST00000392770 VRK1Q99986 396 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms