RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 UQCC3Q6UW78 93 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 SPRED1Q7Z699 444 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 OR4F5Q8NH21 305 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 LIPHQ8WWY8 451 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 MRPL38Q96DV4 380 aaKnown RBP13.65□□□□□ -0.22
CCDC50-201ENST00000392455 OR4F4Q96R69 305 aa13.65□□□□□ -0.22
CCDC50-201ENST00000392455 CDCA3Q99618 268 aaPredicted RBP13.65□□□□□ -0.22
CCDC50-201ENST00000392455 NMNAT1Q9HAN9 279 aaPredicted RBP13.65□□□□□ -0.22
CCDC50-201ENST00000392455 PRAMEF26H0Y7S4 382 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 IGFN1Q86VF2 1251 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 DEGS1O15121 323 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 RRASP10301 218 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 CLINT1Q14677 625 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 IER5LQ5T953 404 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 LINC00597Q9H2U6 94 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 GSX1Q9H4S2 264 aaPredicted RBP13.64□□□□□ -0.23
CCDC50-201ENST00000392455 FAM183AA6NL82 134 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 XCR1P46094 333 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 MTNR1BP49286 362 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 RHOUQ7L0Q8 258 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 MUC15Q8N387 334 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 C16orf70Q9BSU1 422 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 MARCH4Q9P2E8 410 aaPredicted RBP13.64□□□□□ -0.23
CCDC50-201ENST00000392455 C10orf71Q711Q0 1435 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 PIKFYVEQ9Y2I7 2098 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 ARPC3O15145 178 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 CAPNS1P04632 268 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 FECHP22830 423 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 GPR12P47775 334 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 LRRTM1Q86UE6 522 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 EDARADDQ8WWZ3 215 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 BCL2L2Q92843 193 aaPredicted RBP13.64□□□□□ -0.23
CCDC50-201ENST00000392455 ZNF300Q96RE9 604 aaPredicted RBP13.64□□□□□ -0.23
CCDC50-201ENST00000392455 WDR73Q6P4I2 378 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 GJC3Q8NFK1 279 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 OR5H6Q8NGV6 325 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 ASB11Q8WXH4 323 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 PAAF1Q9BRP4 392 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 SELENOIQ9C0D9 397 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 NSG2Q9Y328 171 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 ZNF724A8MTY0 619 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 SDHDO14521 159 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 AIFM1O95831 613 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 GDF1P27539 372 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 RGNQ15493 299 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 MOGAT2Q3SYC2 334 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 HSD17B11Q8NBQ5 300 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 OR10G3Q8NGC4 313 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 DVL3Q92997 716 aaPredicted RBP13.64□□□□□ -0.23
CCDC50-201ENST00000392455 NOSIPQ9Y314 301 aaKnown RBP13.64□□□□□ -0.23
CCDC50-201ENST00000392455 MRPS16Q9Y3D3 137 aaKnown RBP13.64□□□□□ -0.23
CCDC50-201ENST00000392455 ZNF93P35789 620 aaPredicted RBP13.64□□□□□ -0.23
CCDC50-201ENST00000392455 PSMB2P49721 201 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 CNN1P51911 297 aaKnown RBP13.64□□□□□ -0.23
CCDC50-201ENST00000392455 PDZK1IP1Q13113 114 aa13.64□□□□□ -0.23
CCDC50-201ENST00000392455 ZNF256Q9Y2P7 627 aaPredicted RBP13.64□□□□□ -0.23
CCDC50-201ENST00000392455 A6NDN8 102 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 EN2P19622 333 aaPredicted RBP13.63□□□□□ -0.23
CCDC50-201ENST00000392455 NKX2-5P52952 324 aaPredicted RBP13.63□□□□□ -0.23
CCDC50-201ENST00000392455 ZXDBP98169 803 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 SLC10A2Q12908 348 aaPredicted RBP13.63□□□□□ -0.23
CCDC50-201ENST00000392455 IP6K3Q96PC2 410 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 UTP23Q9BRU9 249 aaKnown RBP13.63□□□□□ -0.23
CCDC50-201ENST00000392455 ALOXE3Q9BYJ1 711 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 GABARAPL1Q9H0R8 117 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 PHRF1Q9P1Y6 1649 aaKnown RBP13.63□□□□□ -0.23
CCDC50-201ENST00000392455 LGI1O95970 557 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 PIAS3Q9Y6X2 628 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 HIST1H1TP22492 207 aaPredicted RBP13.63□□□□□ -0.23
CCDC50-201ENST00000392455 C17orf67Q0P5P2 114 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 OXA1LQ15070 435 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 EXT1Q16394 746 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 TP53I3Q53FA7 332 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 PLA1AQ53H76 456 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 C17orf107Q6ZR85 190 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 CMTM4Q8IZR5 234 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 OR6M1Q8NGM8 313 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 NPAS1Q99742 590 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 ATP13A2Q9NQ11 1180 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 AK3Q9UIJ7 227 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 STYXL1Q9Y6J8 313 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 CHD5Q8TDI0 1954 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 KLRC4-KLRK1H3BQV0 150 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 GABRPO00591 440 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 CLEC12BQ2HXU8 276 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 TUSC1Q2TAM9 212 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 Q499Y3 187 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 LRP10Q7Z4F1 713 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 PARP16Q8N5Y8 322 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 ANKRD53Q8N9V6 530 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 POFUT1Q9H488 388 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 KCND3Q9UK17 655 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 CACNA1DQ01668 2161 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 CD70P32970 193 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 AHRP35869 848 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 SIM1P81133 766 aaPredicted RBP13.63□□□□□ -0.23
CCDC50-201ENST00000392455 HOXA4Q00056 320 aaPredicted RBP13.63□□□□□ -0.23
CCDC50-201ENST00000392455 LPAL2Q16609 132 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 PLK5Q496M5 336 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 NAXDQ8IW45 347 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms