RNA–Protein interactions for RNA: ENST00000392004.7

COL6A3-205, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 4,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-205ENST00000392004 V9GYH0 126 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 CACNA1DQ01668 2161 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 LY6G6EA0A0G2JKS1 128 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 OR6C76A6NM76 312 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 AGFG2O95081 481 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 SLC2A10O95528 541 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 UMODP07911 640 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 COX6A1P12074 109 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 EIF1P41567 113 aaKnown RBP9.31□□□□□ -0.92
COL6A3-205ENST00000392004 TGFBR3Q03167 851 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 DUSP8Q13202 625 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 Q5BKY6 102 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 OR7E24Q6IFN5 339 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 CDH24Q86UP0 819 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 PM20D2Q8IYS1 436 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 BATF2Q8N1L9 274 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 MAP6Q96JE9 813 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 RNF170Q96K19 258 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 WDFY2Q96P53 400 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 SIGLEC12Q96PQ1 595 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 WDR54Q9H977 334 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 MALT1Q9UDY8 824 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 U3KQA8 63 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 C1QBP02746 253 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 PTPN6P29350 595 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 GIPRP48546 466 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 IDH3GP51553 393 aaPredicted RBP9.31□□□□□ -0.92
COL6A3-205ENST00000392004 PRSS12P56730 875 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 PUDPQ08623 228 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 SSX1Q16384 188 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 LIPKQ5VXJ0 399 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 JAGN1Q8N5M9 183 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 GATAD2BQ8WXI9 593 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 KCTD7Q96MP8 289 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 OPALINQ96PE5 141 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 CRLF2Q9HC73 371 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 COMMD3Q9UBI1 195 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 CSAG2Q9Y5P2 127 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 CELSR3Q9NYQ7 3312 aa9.31□□□□□ -0.92
COL6A3-205ENST00000392004 FER1L5A0AVI2 2057 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 SLC22A20A6NK97 555 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 SEMG1P04279 462 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 PATE4P0C8F1 98 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 OSMP13725 252 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 FUT7Q11130 342 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 IL18Q14116 193 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 TP53I3Q53FA7 332 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 IDO2Q6ZQW0 420 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 SLC16A14Q7RTX9 510 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 CD163Q86VB7 1156 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 GPR32P1Q8NGA4 272 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 OR4F15Q8NGB8 312 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 OR2T4Q8NH00 348 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 LRRC46Q96FV0 321 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 ZNF350Q9GZX5 532 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 C20orf141Q9NUB4 165 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 ALG5Q9Y673 324 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 LOC105371267A0A1B0GV96 52 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 AKR7A2O43488 359 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 CSF3P09919 207 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 MAKP20794 623 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 PCOLCEQ15113 449 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 ZNF79Q15937 498 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 MEDAGQ5VYS4 303 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 COX15Q7KZN9 410 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 DPY19L4Q7Z388 723 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 SLC37A3Q8NCC5 494 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 PGAM5Q96HS1 289 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 HDHD2Q9H0R4 259 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 NLKQ9UBE8 527 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 ADAM30Q9UKF2 790 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 TRAV36DV7A0A075B6V5 113 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 CHMP24386 653 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 GALNSP34059 522 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 KIR2DL3P43628 341 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 DIO1P49895 249 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 HCCSP53701 268 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 SLC35A1P78382 337 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 MFSD13AQ14CX5 517 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 C22orf42Q6IC83 251 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 MISPQ8IVT2 679 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 OR8H3Q8N146 312 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 CA5BP1Q8WTZ4 195 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 APH1AQ96BI3 265 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 CCDC120Q96HB5 630 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 HYLS1Q96M11 299 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 UCN2Q96RP3 112 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 CDH20Q9HBT6 801 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 HHATLQ9HCP6 504 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 EMC7Q9NPA0 242 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 NOTCH3Q9UM47 2321 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 PCDH15Q96QU1 1955 aa9.3□□□□□ -0.92
COL6A3-205ENST00000392004 I3L521 148 aa9.29□□□□□ -0.92
COL6A3-205ENST00000392004 EIF4E2O60573 245 aaKnown RBP9.29□□□□□ -0.92
COL6A3-205ENST00000392004 ENTPD6O75354 484 aa9.29□□□□□ -0.92
COL6A3-205ENST00000392004 ADAP00813 363 aa9.29□□□□□ -0.92
COL6A3-205ENST00000392004 IL1AP01583 271 aa9.29□□□□□ -0.92
COL6A3-205ENST00000392004 IGHG1P01857 330 aa9.29□□□□□ -0.92
COL6A3-205ENST00000392004 SP1P08047 785 aa9.29□□□□□ -0.92
COL6A3-205ENST00000392004 CLDN20P56880 219 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms