RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 TCP10Q12799 353 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 TSTA3Q13630 321 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 SIM2Q14190 667 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CARTPTQ16568 116 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 SLC25A52Q3SY17 297 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 AARDQ4LEZ3 155 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 ORMDL2Q53FV1 153 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 ANKRD26P1Q6NSI1 321 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CNIH2Q6PI25 160 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 WASH2PQ6VEQ5 465 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 TMEM179Q6ZVK1 233 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 DAZ4Q86SG3 579 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 STK40Q8N2I9 435 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CATSPER1Q8NEC5 780 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 STEAP2Q8NFT2 490 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 PIFOQ8TCI5 191 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 SDR42E1Q8WUS8 393 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 DEPDC1BQ8WUY9 529 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 PTX4Q96A99 478 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 SGK3Q96BR1 496 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 THUMPD3Q9BV44 507 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 MRPL9Q9BYD2 267 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CXCL16Q9H2A7 254 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 TUBA4BQ9H853 241 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 VPS37BQ9H9H4 285 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 FN3KRPQ9HA64 309 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 DAZ1Q9NQZ3 744 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 AIPL1Q9NZN9 384 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 FETUBQ9UGM5 382 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 DDX19BQ9UMR2 479 aa-0.76□□□□□ -2.53
RNU6-1239P-201ENST00000391310 SSH2Q76I76 1423 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CCDC182A6NF36 153 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 RS1O15537 224 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 OR7C2O60412 319 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 B3GAT3O94766 335 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 RAB3DO95716 219 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CA1P00915 261 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 IFNAR1P17181 557 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 HOXB8P17481 243 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 POLR2EP19388 210 aaKnown RBP-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 PCMT1P22061 227 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 TMED10P49755 219 aaKnown RBP-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CCNG1P51959 295 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 FOXA1P55317 472 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 PKNOX1P55347 436 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 PLCXD2Q0VAA5 305 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CHRNA6Q15825 494 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 KLHL12Q53G59 568 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 PDZD11Q5EBL8 140 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 DLEU7Q6UYE1 221 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 KCTD9Q7L273 389 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 PEX26Q7Z412 305 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 TMEM17Q86X19 198 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 ATP6V0D2Q8N8Y2 350 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 LEMD2Q8NC56 503 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 B3GNT7Q8NFL0 401 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 SLC26A10Q8NG04 563 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 OR5T1Q8NG75 326 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 OR4C13Q8NGP0 309 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 ZNF606Q8WXB4 792 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 RBBP8Q99708 897 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 SLC6A7Q99884 636 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 HIGD2AQ9BW72 106 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CYSTM1Q9H1C7 97 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 GBA3Q9H227 469 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 COPS7BQ9H9Q2 264 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 POPDC2Q9HBU9 364 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 ZNF160Q9HCG1 818 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 FAM49BQ9NUQ9 324 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CNIH4Q9P003 139 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 HOOK1Q9UJC3 728 aaKnown RBP-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 KIAA1257Q9ULG3 409 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 LIPT1Q9Y234 373 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 SOX21Q9Y651 276 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 FLNCQ14315 2725 aa-0.77□□□□□ -2.53
RNU6-1239P-201ENST00000391310 ZFYVE26Q68DK2 2539 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 IGHV3-72A0A0B4J1Y9 119 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 TRAV39A0A0B4J263 110 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 FAM47DPA6NHR8 397 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 G3V3Q6 166 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 ZNF208O43345 1280 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 SH3BP5O60239 455 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 PALMO75781 387 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 IGHV3-11P01762 117 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CD1CP29017 333 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 PRDX2P32119 198 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 GPR6P46095 362 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 TPMTP51580 245 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 ZNF138P52744 262 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 SUB1P53999 127 aaKnown RBP eCLIP-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 ERVK-25P63136 954 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 CCNA1P78396 465 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 PPP1R8Q12972 351 aaKnown RBP-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 LGALSLQ3ZCW2 172 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 YIF1BQ5BJH7 314 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 AVPI1Q5T686 147 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 OR52E8Q6IFG1 317 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 C16orf87Q6PH81 154 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 DEGS2Q6QHC5 323 aa-0.78□□□□□ -2.53
RNU6-1239P-201ENST00000391310 PLET1Q6UQ28 207 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms