RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SUB1P53999 127 aaKnown RBP eCLIP-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 TNFRSF17Q02223 184 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 MXD4Q14582 209 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 TP53I3Q53FA7 332 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 MPV17L2Q567V2 206 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 ANKRD22Q5VYY1 191 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 APOBEC3HQ6NTF7 200 aaKnown RBP-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 PRSS54Q6PEW0 395 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 ASCL5Q7RTU5 278 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 SNX20Q7Z614 316 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 PIANPQ8IYJ0 282 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 DHRSXQ8N5I4 330 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 ACOT4Q8N9L9 421 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 ACTL9Q8TC94 416 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 DQX1Q8TE96 717 aaKnown RBP-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 CACNG8Q8WXS5 425 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 MYLPFQ96A32 169 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 OXGR1Q96P68 337 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 TIMM17AQ99595 171 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 RETNLBQ9BQ08 111 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 NIPSNAP3BQ9BS92 247 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 MAF1Q9H063 256 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 TRIM10Q9UDY6 481 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 COPS3Q9UNS2 423 aa-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-239P-201ENST00000390990 RPRD2Q5VT52 1461 aaKnown RBP-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 IGHV7-4-1A0A0J9YVY3 117 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 A0A1W2PNM2 257 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 FAM47DPA6NHR8 397 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 FIBPO43427 364 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 CHST10O43529 356 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 REM1O75628 298 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 SCELO95171 688 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 IGHG4P01861 327 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 H2BFMP0C1H6 154 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 CSNK1EP49674 416 aaKnown RBP-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 ERVK-25P63136 954 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 IL5RAQ01344 420 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 NCBP1Q09161 790 aaKnown RBP-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 SMU1Q2TAY7 513 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 SLC25A52Q3SY17 297 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 ORMDL2Q53FV1 153 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 ZNF660Q6AZW8 331 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 FBXW12Q6X9E4 464 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 TMEM179Q6ZVK1 233 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 UTS2BQ765I0 119 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 CBWD2Q8IUF1 395 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 MISPQ8IVT2 679 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 STK40Q8N2I9 435 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 DNAAF3Q8N9W5 541 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 DENND6BQ8NEG7 585 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 OR10A7Q8NGE5 316 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 GOT1L1Q8NHS2 421 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 GIPC3Q8TF64 312 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 PTX4Q96A99 478 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 RUFY1Q96T51 708 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 ABCG5Q9H222 651 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 REEP4Q9H6H4 257 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 TMEM231Q9H6L2 316 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 ACTR8Q9H981 624 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 COMMD8Q9NX08 183 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 TMOD2Q9NZR1 351 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 FETUBQ9UGM5 382 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 DNPEPQ9ULA0 475 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 FOXJ3Q9UPW0 622 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 RASD1Q9Y272 281 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 HYOU1Q9Y4L1 999 aa-0.48□□□□□ -2.49
RNU6-239P-201ENST00000390990 ZNF726A6NNF4 738 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 SDHDO14521 159 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 NUPL2O15504 423 aaKnown RBP-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 UTS2O95399 124 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 RAB3DO95716 219 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 CA3P07451 260 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 ABHD2P08910 425 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 OTX1P32242 354 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 HRH1P35367 487 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 HPCAL1P37235 193 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 AP3M2P53677 418 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 GFPT1Q06210 699 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 SCRN3Q0VDG4 424 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 OXA1LQ15070 435 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 XKR7Q5GH72 579 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 TPGS2Q68CL5 300 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 TEX43Q6ZNM6 134 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 DPY19L4Q7Z388 723 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 EGFL6Q8IUX8 553 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 FNDC5Q8NAU1 212 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 MINDY2Q8NBR6 621 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 ZNF563Q8TA94 476 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 PEX13Q92968 403 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 PINX1Q96BK5 328 aaKnown RBP-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 RBBP8Q99708 897 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 TXNDC17Q9BRA2 123 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 EDEM2Q9BV94 578 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 MMADHCQ9H3L0 296 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 PRMT8Q9NR22 394 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 ABCC4O15439 1325 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 CARMIL1Q5VZK9 1371 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 ADGRB3O60242 1522 aa-0.49□□□□□ -2.49
RNU6-239P-201ENST00000390990 IGHV3-49A0A0A0MS15 119 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms