RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 FANCIQ9NVI1 1328 aa1.55□□□□□ -2.16
TRAV40-201ENST00000390467 IGLV2-18A0A075B6J9 118 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 TRAV25A0A0B4J276 109 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 FAM240BA0A1B0GVZ2 78 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 GOLGA6L4A6NEF3 574 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 GOLGA6L19H0YKK7 550 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 GOLGA8TH3BQL2 631 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 GPR171O14626 319 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 RAD51BO15315 384 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 STX7O15400 261 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF208O43345 1280 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 CYTH3O43739 400 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 FCMRO60667 390 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 TPST2O60704 377 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 NDUFS6O75380 124 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 VPS26AO75436 327 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 MBD3O95983 291 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 NDUFB10O96000 172 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 P04436 131 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 DCNP07585 359 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 CCL2P13500 99 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 TCN1P20061 433 aaPredicted RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 IL32P24001 234 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 HTR2AP28223 471 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 ADRA1AP35348 466 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 NAA10P41227 235 aaPredicted RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 GRIA1P42261 906 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 CRATP43155 626 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 NAMPTP43490 491 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 NMUP48645 174 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 HSPA13P48723 471 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 CCT3P49368 545 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 TUFMP49411 452 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 GDI2P50395 445 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 PSMD7P51665 324 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 DAOAP59103 153 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 RPS15P62841 145 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 SKP1P63208 163 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 NCBP1Q09161 790 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 RIPPLY1Q0D2K3 151 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 RAB40BQ12829 278 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 GPR176Q14439 515 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 ANGPT1Q15389 498 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 USF2Q15853 346 aaPredicted RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 SSX2Q16385 188 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 SLC5A12Q1EHB4 618 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 RSPO1Q2MKA7 263 aaPredicted RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 BEX5Q5H9J7 111 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 CLVS2Q5SYC1 327 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 PRAMEF5Q5TYX0 476 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 PRAMEF6Q5VXH4 476 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 PLCXD3Q63HM9 321 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 NDUFAF7Q7L592 441 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 ITPRIPQ8IWB1 547 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 NELFCDQ8IXH7 590 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 FAM58AQ8N1B3 248 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 SVOPLQ8N434 492 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 FAM86B1Q8N7N1 296 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF680Q8NEM1 530 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 OR8J2Q8NGG1 315 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 NANPQ8TBE9 248 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 FANK1Q8TC84 345 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 CACNG8Q8WXS5 425 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 OSTF1Q92882 214 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 RAB1CQ92928 201 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 EMG1Q92979 244 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 MRGPRFQ96AM1 343 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 CIDECQ96AQ7 238 aaPredicted RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 TMA16Q96EY4 203 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 C4orf36Q96KX1 117 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 SENP8Q96LD8 212 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 VSTM2LQ96N03 204 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF317Q96PQ6 595 aaPredicted RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 SLC29A1Q99808 456 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 MRPL13Q9BYD1 178 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 UPF3BQ9BZI7 483 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 MFFQ9GZY8 342 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 HDHD2Q9H0R4 259 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 RHOJQ9H4E5 214 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 TMEM185BQ9H7F4 350 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 GEMIN7Q9H840 131 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF430Q9H8G1 570 aaPredicted RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 CALHM2Q9HA72 323 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 VAT1LQ9HCJ6 419 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 SIRT7Q9NRC8 400 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 CCL28Q9NRJ3 127 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 PAQR5Q9NXK6 330 aaPredicted RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 SLC25A37Q9NYZ2 338 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 GCNT4Q9P109 453 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 ATXN10Q9UBB4 475 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 SLC7A8Q9UHI5 535 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 ENPP5Q9UJA9 477 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 GGA2Q9UJY4 613 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 PACSIN2Q9UNF0 486 aaPredicted RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 RNF6Q9Y252 685 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 RHBDD3Q9Y3P4 386 aa1.54□□□□□ -2.16
TRAV40-201ENST00000390467 PUS1Q9Y606 427 aaKnown RBP eCLIP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 COL27A1Q8IZC6 1860 aaPredicted RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 PHF3Q92576 2039 aaKnown RBP1.54□□□□□ -2.16
TRAV40-201ENST00000390467 NUP214P35658 2090 aaPredicted RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms