RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 GRPP07492 148 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 SLC2A1P11166 492 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 CAV2P51636 162 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 RPP30P78346 268 aaKnown RBP9.37□□□□□ -0.91
PKP4-201ENST00000389757 SLC22A25Q6T423 547 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 BCDIN3DQ7Z5W3 292 aaKnown RBP9.37□□□□□ -0.91
PKP4-201ENST00000389757 SPAG16Q8N0X2 631 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 BHLHE23Q8NDY6 225 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 OR52N1Q8NH53 320 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 RHOXF1Q8NHV9 184 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 RAB3CQ96E17 227 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 LRFN5Q96NI6 719 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 TBXA2RP21731 343 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 ZNF93P35789 620 aaPredicted RBP9.37□□□□□ -0.91
PKP4-201ENST00000389757 RPS25P62851 125 aaKnown RBP9.37□□□□□ -0.91
PKP4-201ENST00000389757 UBE2NLQ5JXB2 153 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 PRAMEF9Q5VWM5 478 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 ANKRD37Q7Z713 158 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 SLC15A4Q8N697 577 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 SEMA6DQ8NFY4 1073 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 OR4N2Q8NGD1 307 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 PIGTQ969N2 578 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 KCTD12Q96CX2 325 aaKnown RBP9.37□□□□□ -0.91
PKP4-201ENST00000389757 LRRC3BQ96PB8 259 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 ASH2LQ9UBL3 628 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 MAB21L2Q9Y586 359 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 GAPDHSO14556 408 aaPredicted RBP9.37□□□□□ -0.91
PKP4-201ENST00000389757 AVPR2P30518 371 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 OR2A2Q6IF42 318 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 STK35Q8TDR2 534 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 ARSGQ96EG1 525 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 TEAD3Q99594 435 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 C7orf50Q9BRJ6 194 aaKnown RBP9.37□□□□□ -0.91
PKP4-201ENST00000389757 RTL8AQ9BWD3 113 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 A0A1W2PQF6 199 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 HMX3A6NHT5 357 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 M0R036 132 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 HSPB6O14558 160 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 SC5DO75845 299 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 PTTG1O95997 202 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 CPT2P23786 658 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 DEFA5Q01523 94 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 ACER2Q5QJU3 275 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 PWWP2BQ6NUJ5 590 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 METAP1DQ6UB28 335 aaPredicted RBP9.37□□□□□ -0.91
PKP4-201ENST00000389757 ZNF793Q6ZN11 406 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 DOK3Q7L591 496 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 WDR5BQ86VZ2 330 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 NKAIN3Q8N8D7 197 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 PHYHIPQ92561 330 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 OCSTAMPQ9BR26 566 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 ARL6Q9H0F7 186 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 PRMT8Q9NR22 394 aaPredicted RBP9.37□□□□□ -0.91
PKP4-201ENST00000389757 NRXN2Q9P2S2 1712 aa9.37□□□□□ -0.91
PKP4-201ENST00000389757 A6NIN4 97 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 RNF212BA8MTL3 300 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 GOSR2O14653 212 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 SEC14L2O76054 403 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 SLC22A5O76082 557 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 SCG5P05408 212 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 GAAP10253 952 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 BLVRBP30043 206 aaPredicted RBP9.36□□□□□ -0.91
PKP4-201ENST00000389757 EDDM3BP56851 147 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 CATR1Q13166 79 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 METTL11BQ5VVY1 283 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 RHBDD2Q6NTF9 364 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 JMJD6Q6NYC1 403 aaPredicted RBP9.36□□□□□ -0.91
PKP4-201ENST00000389757 WDR74Q6RFH5 385 aaPredicted RBP9.36□□□□□ -0.91
PKP4-201ENST00000389757 CD163Q86VB7 1156 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 FAM71CQ8NEG0 241 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 FNDC9Q8TBE3 224 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 RNF128Q8TEB7 428 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 CPNE4Q96A23 557 aaPredicted RBP9.36□□□□□ -0.91
PKP4-201ENST00000389757 LHX9Q9NQ69 397 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 LUZP4Q9P127 313 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 LSM5Q9Y4Y9 91 aaKnown RBP9.36□□□□□ -0.91
PKP4-201ENST00000389757 PATE3B3GLJ2 98 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 BET1O15155 118 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 SERPINA7P05543 415 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 HIST1H1CP16403 213 aaKnown RBP9.36□□□□□ -0.91
PKP4-201ENST00000389757 ABCD3P28288 659 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 ETV5P41161 510 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 LGALS4P56470 323 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 MCCD1P59942 119 aaPredicted RBP9.36□□□□□ -0.91
PKP4-201ENST00000389757 YBX1P67809 324 aaKnown RBP9.36□□□□□ -0.91
PKP4-201ENST00000389757 WDR88Q6ZMY6 472 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 HMGCLL1Q8TB92 370 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 RNF170Q96K19 258 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 OR14A2Q96R54 314 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 CMC2Q9NRP2 79 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 NUBP2Q9Y5Y2 271 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 A0A096LPE4 126 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 IGHV3-15A0A0B4J1V0 119 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 A0A1W2PPZ6 126 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 M0R1B8 84 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 IFNA1P01562 189 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 NAGAP17050 411 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 MRPL19P49406 292 aaKnown RBP9.36□□□□□ -0.91
PKP4-201ENST00000389757 ESCO2Q56NI9 601 aa9.36□□□□□ -0.91
PKP4-201ENST00000389757 MTFR2Q6P444 385 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms