RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 GLO1Q04760 184 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 FMODQ06828 376 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 KLF10Q13118 480 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 TOP3AQ13472 1001 aaPredicted RBP12.13□□□□□ -0.47
SHOX-202ENST00000381575 NKPD1Q17RQ9 610 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 MMEL1Q495T6 779 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 RGS7BPQ6MZT1 257 aaPredicted RBP12.13□□□□□ -0.47
SHOX-202ENST00000381575 CGB2Q6NT52 195 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 TMEM53Q6P2H8 277 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 SLC16A14Q7RTX9 510 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 CLDND2Q8NHS1 167 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 SGTBQ96EQ0 304 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 DENND2DQ9H6A0 471 aaPredicted RBP12.13□□□□□ -0.47
SHOX-202ENST00000381575 ZNF275Q9NSD4 429 aaPredicted RBP12.13□□□□□ -0.47
SHOX-202ENST00000381575 FGFR1OP2Q9NVK5 253 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 RIMS3Q9UJD0 308 aa12.13□□□□□ -0.47
SHOX-202ENST00000381575 IGKV1D-43A0A0B4J1Z2 117 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 LOC100653049A0A140TA62 436 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 KRT34O76011 436 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 H2AFXP16104 143 aaPredicted RBP12.12□□□□□ -0.47
SHOX-202ENST00000381575 SRP14P37108 136 aaKnown RBP12.12□□□□□ -0.47
SHOX-202ENST00000381575 GPR6P46095 362 aaPredicted RBP12.12□□□□□ -0.47
SHOX-202ENST00000381575 LAPTM4AQ15012 233 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 CLDN22Q8N7P3 220 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 RBM15BQ8NDT2 890 aaKnown RBP12.12□□□□□ -0.47
SHOX-202ENST00000381575 C10orf82Q8WW14 230 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 TMEM239Q8WW34 195 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 RASSF5Q8WWW0 418 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 NSMAFQ92636 917 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 TPD52L3Q96J77 140 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 ZNF583Q96ND8 569 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 SIKE1Q9BRV8 207 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 MS4A5Q9H3V2 200 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 VIPAS39Q9H9C1 493 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 INIPQ9NRY2 104 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 TREM2Q9NZC2 230 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 TMEFF2Q9UIK5 374 aaPredicted RBP12.12□□□□□ -0.47
SHOX-202ENST00000381575 FBXL3Q9UKT7 428 aa12.12□□□□□ -0.47
SHOX-202ENST00000381575 FAM157AC9JC47 383 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 PPIHO43447 177 aaKnown RBP12.11□□□□□ -0.47
SHOX-202ENST00000381575 CDC14BO60729 498 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 OR5F1O95221 314 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 SAGP10523 405 aaPredicted RBP12.11□□□□□ -0.47
SHOX-202ENST00000381575 ACADSP16219 412 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 CCNOP22674 350 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 ZNF84P51523 738 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 CCL8P80075 99 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 CD47Q08722 323 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 HIST3H3Q16695 136 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 SLC36A2Q495M3 483 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 CYBRD1Q53TN4 286 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 SPATA46Q5T0L3 261 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 METTL21CQ5VZV1 264 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 IGFN1Q86VF2 1251 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 MICU2Q8IYU8 434 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 POU5F2Q8N7G0 328 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 OR8J3Q8NGG0 315 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 HDAC2Q92769 488 aaKnown RBP12.11□□□□□ -0.47
SHOX-202ENST00000381575 RDH5Q92781 318 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 HPS1Q92902 700 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 MRPL13Q9BYD1 178 aaKnown RBP12.11□□□□□ -0.47
SHOX-202ENST00000381575 SAR1AQ9NR31 198 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 ARGLU1Q9NWB6 273 aaPredicted RBP12.11□□□□□ -0.47
SHOX-202ENST00000381575 BAG5Q9UL15 447 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 UGT2A1Q9Y4X1 527 aa12.11□□□□□ -0.47
SHOX-202ENST00000381575 MMP7P09237 267 aaPredicted RBP12.1□□□□□ -0.47
SHOX-202ENST00000381575 TROVE2P10155 538 aaKnown RBP eCLIP12.1□□□□□ -0.47
SHOX-202ENST00000381575 ACHEP22303 614 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 RBM34P42696 430 aaKnown RBP12.1□□□□□ -0.47
SHOX-202ENST00000381575 YAP1P46937 504 aaKnown RBP12.1□□□□□ -0.47
SHOX-202ENST00000381575 DAP3P51398 398 aaKnown RBP12.1□□□□□ -0.47
SHOX-202ENST00000381575 ARFIP2P53365 341 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 KLF3P57682 345 aaPredicted RBP12.1□□□□□ -0.47
SHOX-202ENST00000381575 HSF2Q03933 536 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 HNRNPA0Q13151 305 aaKnown RBP12.1□□□□□ -0.47
SHOX-202ENST00000381575 SGCAQ16586 387 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 TBC1D28Q2M2D7 210 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 PABPC1L2AQ5JQF8 200 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 ARMC4Q5T2S8 1044 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 AVPI1Q5T686 147 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 CPEB3Q8NE35 698 aaKnown RBP12.1□□□□□ -0.47
SHOX-202ENST00000381575 AKR7LQ8NHP1 331 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 SYNPRQ8TBG9 265 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 SH3GL1Q99961 368 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 ARMCX1Q9P291 453 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 RHCGQ9UBD6 479 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 ZNF346Q9UL40 294 aaKnown RBP12.1□□□□□ -0.47
SHOX-202ENST00000381575 TANC2Q9HCD6 1990 aa12.1□□□□□ -0.47
SHOX-202ENST00000381575 IQCMA0A1B0GVH7 501 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 FAM220BPB1ANY3 271 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 ENTPD5O75356 428 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 RP2O75695 350 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 ZNF32P17041 273 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 APLNRP35414 380 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 THBS2P35442 1172 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 ERVK-25P63136 954 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 TMEM255AQ5JRV8 349 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 ERICH5Q6P6B1 374 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 ZNF771Q7L3S4 317 aaPredicted RBP12.09□□□□□ -0.47
SHOX-202ENST00000381575 VTCN1Q7Z7D3 282 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms