RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 RPL18Q07020 188 aaKnown RBP12.9□□□□□ -0.34
CLCN4-201ENST00000380829 OR5J2Q8NH18 312 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 OR8K3Q8NH51 312 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 COQ8AQ8NI60 647 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 NEIL3Q8TAT5 605 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 GPX7Q96SL4 187 aaPredicted RBP12.9□□□□□ -0.34
CLCN4-201ENST00000380829 DDOQ99489 341 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 SPSB2Q99619 263 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 WDR77Q9BQA1 342 aaPredicted RBP12.9□□□□□ -0.34
CLCN4-201ENST00000380829 CCDC86Q9H6F5 360 aaKnown RBP12.9□□□□□ -0.34
CLCN4-201ENST00000380829 CYB5R1Q9UHQ9 305 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 ZNF346Q9UL40 294 aaKnown RBP12.9□□□□□ -0.34
CLCN4-201ENST00000380829 TTC28Q96AY4 2481 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 MEIKINA0A087WXM9 373 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 TRBV11-1A0A0K0K1C0 115 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 SELENOFO60613 162 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 PGCP20142 388 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 GIFP27352 417 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 TSPAN5P62079 268 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 BDH1Q02338 343 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 POU4F2Q12837 409 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 CBFBQ13951 182 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 PON3Q15166 354 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 HSD17B12Q53GQ0 312 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 LURAP1LQ8IV03 231 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 LRRC75AQ8NAA5 344 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 LIPHQ8WWY8 451 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 ZC3H10Q96K80 434 aaKnown RBP12.9□□□□□ -0.34
CLCN4-201ENST00000380829 SFXN2Q96NB2 322 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 LRFN5Q96NI6 719 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 TSSK2Q96PF2 358 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 CNN2Q99439 309 aaKnown RBP12.9□□□□□ -0.34
CLCN4-201ENST00000380829 CRB3Q9BUF7 120 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 CHIAQ9BZP6 476 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 PTTG3PQ9NZH4 202 aa12.9□□□□□ -0.34
CLCN4-201ENST00000380829 KLF2Q9Y5W3 355 aaPredicted RBP12.9□□□□□ -0.34
CLCN4-201ENST00000380829 FAM74A7A6NL05 159 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 VSTM2BA6NLU5 285 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 D6RAR5 112 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 H7C1C5 153 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 CER1O95813 267 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 IGF2P01344 180 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 TCRBP04435 133 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 CD14P08571 375 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 GP1BBP13224 206 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 PYCR1P32322 319 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 LCN6P62502 163 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 ACTC1P68032 377 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 ACTA1P68133 377 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 SLC3A1Q07837 685 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 OPCMLQ14982 345 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 FAM74A3Q4VXF1 159 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 TP53I3Q53FA7 332 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 SFRP5Q5T4F7 317 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 FAM199XQ6PEV8 388 aaPredicted RBP12.89□□□□□ -0.35
CLCN4-201ENST00000380829 ALKAL2Q6UX46 152 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 FAM122BQ7Z309 247 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 NR2C2APQ86WQ0 139 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 TMEM105Q8N8V8 129 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 SLC6A15Q9H2J7 730 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 FAM25EA8MYX2 175 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 APOC3P02656 99 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 EIF4EP06730 217 aaKnown RBP12.89□□□□□ -0.35
CLCN4-201ENST00000380829 NMBP08949 121 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 ZNF28P17035 718 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 GRPRP30550 384 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 ACVR1BP36896 505 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 P2RX1P51575 399 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 IDNKQ5T6J7 187 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 RGS7BPQ6MZT1 257 aaPredicted RBP12.89□□□□□ -0.35
CLCN4-201ENST00000380829 JAZF1Q86VZ6 243 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 SLC35F2Q8IXU6 374 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 CLRN3Q8NCR9 226 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 SLC25A36Q96CQ1 311 aa12.89□□□□□ -0.35
CLCN4-201ENST00000380829 TMEM200CA6NKL6 621 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 DNASE2O00115 360 aaPredicted RBP12.88□□□□□ -0.35
CLCN4-201ENST00000380829 ADAM10O14672 748 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 SLC25A12O75746 678 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 RGS9O75916 674 aaPredicted RBP12.88□□□□□ -0.35
CLCN4-201ENST00000380829 LDOC1O95751 146 aaPredicted RBP12.88□□□□□ -0.35
CLCN4-201ENST00000380829 ALDOBP05062 364 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 SULT1A3P0DMM9 295 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 SULT1A4P0DMN0 295 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 DIO1P49895 249 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 LGALS3BPQ08380 585 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 NLRC3Q7RTR2 1065 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 CPEB2Q7Z5Q1 589 aaKnown RBP12.88□□□□□ -0.35
CLCN4-201ENST00000380829 GPR119Q8TDV5 335 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 OR2M2Q96R28 347 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 NMNAT2Q9BZQ4 307 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 DPAGT1Q9H3H5 408 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 TMED7-TICAM2A0A0A6YYA0 188 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 A8MXK9 166 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 KRBOX1C9JBD0 128 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 C11orf98E9PRG8 122 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 SUSD5O60279 629 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 GMDSO60547 372 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 BGLAPP02818 100 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 HIST1H2ABP04908 130 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 CCL4P13236 92 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms