RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 SLC38A2Q96QD8 506 aa16.52■□□□□ 0.24
SMN2-202ENST00000380742 HCAR1Q9BXC0 346 aa16.52■□□□□ 0.24
SMN2-202ENST00000380742 VCX3BQ9H321 246 aa16.52■□□□□ 0.24
SMN2-202ENST00000380742 MED20Q9H944 212 aa16.52■□□□□ 0.24
SMN2-202ENST00000380742 SRA1Q9HD15 236 aaKnown RBP16.52■□□□□ 0.24
SMN2-202ENST00000380742 RPRD1BQ9NQG5 326 aaKnown RBP16.52■□□□□ 0.24
SMN2-202ENST00000380742 TAS2R16Q9NYV7 291 aa16.52■□□□□ 0.24
SMN2-202ENST00000380742 FAM183AA6NL82 134 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 H0YJX3 145 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 SLC16A7O60669 478 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 NR2C1P13056 603 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 GRNP28799 593 aaKnown RBP16.51■□□□□ 0.23
SMN2-202ENST00000380742 ADARB1P78563 741 aaKnown RBP16.51■□□□□ 0.23
SMN2-202ENST00000380742 ARF1P84077 181 aaKnown RBP16.51■□□□□ 0.23
SMN2-202ENST00000380742 OR6V1Q8N148 313 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 TCEANCQ8N8B7 351 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 OR9Q1Q8NGQ5 310 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 RNASE6Q93091 150 aaKnown RBP16.51■□□□□ 0.23
SMN2-202ENST00000380742 PTP4A1Q93096 173 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 PLEKHA8Q96JA3 519 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 NMNAT2Q9BZQ4 307 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 HINT3Q9NQE9 182 aaKnown RBP16.51■□□□□ 0.23
SMN2-202ENST00000380742 B9D1Q9UPM9 204 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 UGT2A1Q9Y4X1 527 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 GMPPBQ9Y5P6 360 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 ADGRG4Q8IZF6 3080 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 ZNF99A8MXY4 864 aaPredicted RBP16.51■□□□□ 0.23
SMN2-202ENST00000380742 CCKARP32238 428 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 VHLP40337 213 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 PCYT1AP49585 367 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 STK11Q15831 433 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 SNCBQ16143 134 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 GABRA6Q16445 453 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 PLBD1Q6P4A8 553 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 ZBTB46Q86UZ6 589 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 DHRSXQ8N5I4 330 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 ZNF555Q8NEP9 628 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 OR1K1Q8NGR3 316 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 FAM81AQ8TBF8 368 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 ZNRF4Q8WWF5 429 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 CYGBQ8WWM9 190 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 UBE2FQ969M7 185 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 IL4I1Q96RQ9 567 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 ADI1Q9BV57 179 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 PRRG3Q9BZD7 231 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 RERGLQ9H628 205 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 FKBP7Q9Y680 259 aa16.51■□□□□ 0.23
SMN2-202ENST00000380742 SPTBN1Q01082 2364 aaKnown RBP16.5■□□□□ 0.23
SMN2-202ENST00000380742 IGLV1-36A0A0B4J1U3 117 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 TLX2O43763 284 aaPredicted RBP16.5■□□□□ 0.23
SMN2-202ENST00000380742 KHDRBS3O75525 346 aaKnown RBP16.5■□□□□ 0.23
SMN2-202ENST00000380742 RAD51DO75771 328 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 SEC14L2O76054 403 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 GYPBP06028 91 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 CLUP10909 449 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 PSMB1P20618 241 aaKnown RBP16.5■□□□□ 0.23
SMN2-202ENST00000380742 CRABP1P29762 137 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 UGT2B10P36537 528 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 SLC25A1P53007 311 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 CDC42P60953 191 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 KEAP1Q14145 624 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 IZUMO2Q6UXV1 221 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 BHLHA15Q7RTS1 189 aaPredicted RBP16.5■□□□□ 0.23
SMN2-202ENST00000380742 CPOQ8IVL8 374 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 TMEM163Q8TC26 289 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 HTRA1Q92743 480 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 OTULINQ96BN8 352 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 FOXN4Q96NZ1 517 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 FOXB1Q99853 325 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 NELFAQ9H3P2 528 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 NPDC1Q9NQX5 325 aaPredicted RBP16.5■□□□□ 0.23
SMN2-202ENST00000380742 TMEM38BQ9NVV0 291 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 ZNF226Q9NYT6 803 aa16.5■□□□□ 0.23
SMN2-202ENST00000380742 COA3Q9Y2R0 106 aaPredicted RBP16.5■□□□□ 0.23
SMN2-202ENST00000380742 CIB4A0PJX0 185 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 FAM171A2A8MVW0 826 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 PRR23D1E9PI22 279 aaPredicted RBP16.49■□□□□ 0.23
SMN2-202ENST00000380742 CLIC3O95833 236 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 PRR23D2P0DMB1 279 aaPredicted RBP16.49■□□□□ 0.23
SMN2-202ENST00000380742 SPI1P17947 270 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 CDAP32320 146 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 PYCR1P32322 319 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 CAPGP40121 348 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 ZNF84P51523 738 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 SH3BGRP55822 239 aaPredicted RBP16.49■□□□□ 0.23
SMN2-202ENST00000380742 TTC23Q5W5X9 447 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 FOXL2NBQ6ZUU3 175 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 ZNF627Q7L945 461 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 CXXC5Q7LFL8 322 aaKnown RBP16.49■□□□□ 0.23
SMN2-202ENST00000380742 BBS1Q8NFJ9 593 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 OR51L1Q8NGJ5 315 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 BCL2L2Q92843 193 aaPredicted RBP16.49■□□□□ 0.23
SMN2-202ENST00000380742 KISS1RQ969F8 398 aaPredicted RBP16.49■□□□□ 0.23
SMN2-202ENST00000380742 MUS81Q96NY9 551 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 HDHD5Q9BXW7 423 aa16.49■□□□□ 0.23
SMN2-202ENST00000380742 HELZ2Q9BYK8 2649 aaKnown RBP16.48■□□□□ 0.23
SMN2-202ENST00000380742 COL12A1Q99715 3063 aa16.48■□□□□ 0.23
SMN2-202ENST00000380742 GCN1Q92616 2671 aaKnown RBP16.48■□□□□ 0.23
SMN2-202ENST00000380742 A0A096LPE4 126 aa16.48■□□□□ 0.23
SMN2-202ENST00000380742 A0A1W2PPL8 197 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms