RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 LTC4SQ16873 150 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 SHEQ5VZ18 495 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 SLC35A4Q96G79 324 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 CSF3RQ99062 836 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 DUSP21Q9H596 190 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 CMC2Q9NRP2 79 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 COA3Q9Y2R0 106 aaPredicted RBP14.73□□□□□ -0.05
COL2A1-202ENST00000380518 OR6C65A6NJZ3 312 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 ETV1P50549 477 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 P2RX1P51575 399 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 PMPCAQ10713 525 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 MRPL58Q14197 206 aaKnown RBP14.73□□□□□ -0.05
COL2A1-202ENST00000380518 HIST2H3PS2Q5TEC6 136 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 SLC7A6Q92536 515 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 PUS1Q9Y606 427 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL2A1-202ENST00000380518 RP1L1Q8IWN7 2480 aaPredicted RBP14.73□□□□□ -0.05
COL2A1-202ENST00000380518 RAF1P04049 648 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 NME2P22392 152 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 IRS1P35568 1242 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 APOBEC1P41238 236 aaKnown RBP14.73□□□□□ -0.05
COL2A1-202ENST00000380518 MRPL19P49406 292 aaKnown RBP14.73□□□□□ -0.05
COL2A1-202ENST00000380518 SCGB2A2Q13296 93 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 ZNF266Q14584 549 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 FAM71CQ8NEG0 241 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 PIGTQ969N2 578 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 UHRF2Q96PU4 802 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 GAREM1Q9H706 876 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 ZNF225Q9UK10 706 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 H7C1Q1 480 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 ZNF195O14628 629 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 NXPH2O95156 264 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 PGFP49763 221 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 NAXDQ8IW45 347 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 PRSS35Q8N3Z0 413 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 LRFN5Q96NI6 719 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 HINT3Q9NQE9 182 aaKnown RBP14.73□□□□□ -0.05
COL2A1-202ENST00000380518 ASB1Q9Y576 335 aa14.73□□□□□ -0.05
COL2A1-202ENST00000380518 ZAR1LA6NP61 321 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 GABARAPH6UMI1 98 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 CALCBP10092 127 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 CD22P20273 847 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 CTU2Q2VPK5 515 aaKnown RBP14.72□□□□□ -0.05
COL2A1-202ENST00000380518 NKAIN1Q4KMZ8 207 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 ZNF808Q8N4W9 903 aaPredicted RBP14.72□□□□□ -0.05
COL2A1-202ENST00000380518 ELSPBP1Q96BH3 223 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 SLAMF7Q9NQ25 335 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 TMEM30AQ9NV96 361 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 KCND3Q9UK17 655 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 PCDHGA5Q9Y5G8 931 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 TMEM200CA6NKL6 621 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 PHF1O43189 567 aaPredicted RBP14.72□□□□□ -0.05
COL2A1-202ENST00000380518 FUCA1P04066 466 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 SSX2Q16385 188 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 PTCRAQ6ISU1 281 aaPredicted RBP14.72□□□□□ -0.05
COL2A1-202ENST00000380518 OGFOD3Q6PK18 319 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 LINC00696Q6ZRV3 163 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 TMEM178AQ8NBL3 297 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 SLC30A7Q8NEW0 376 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 SEC22CQ9BRL7 303 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 AHDC1Q5TGY3 1603 aaPredicted RBP14.72□□□□□ -0.05
COL2A1-202ENST00000380518 TXNL1O43396 289 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 CLDN1O95832 211 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 SERPINF1P36955 418 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 DDOSTP39656 456 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 THBS3P49746 956 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 OR1D5P58170 312 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 ACSM5Q6NUN0 579 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 VHLLQ6RSH7 139 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 PARM1Q6UWI2 310 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 RPS19BP1Q86WX3 136 aaKnown RBP14.72□□□□□ -0.05
COL2A1-202ENST00000380518 ZFP82Q8N141 532 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 LGI3Q8N145 548 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 PMP2P02689 132 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 S100A7P31151 101 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 SLC19A1P41440 591 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 GP2P55259 537 aaKnown RBP14.72□□□□□ -0.05
COL2A1-202ENST00000380518 ZNF385BQ569K4 471 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 SOHLH1Q5JUK2 328 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 YOD1Q5VVQ6 348 aaPredicted RBP14.72□□□□□ -0.05
COL2A1-202ENST00000380518 KIRREL1Q96J84 757 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 ZNF576Q9H609 170 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 WASH6PQ9NQA3 447 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 CHRNA9Q9UGM1 479 aa14.72□□□□□ -0.05
COL2A1-202ENST00000380518 KLRC4-KLRK1H3BQV0 150 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 M0R082 166 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 CYB561P49447 251 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 ZNF92Q03936 586 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 DUSP8Q13202 625 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 GLYR1Q49A26 553 aaPredicted RBP14.71□□□□□ -0.05
COL2A1-202ENST00000380518 TRIM61Q5EBN2 209 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 MAML2Q8IZL2 1156 aaPredicted RBP14.71□□□□□ -0.05
COL2A1-202ENST00000380518 PXT1Q8NFP0 134 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 PKMYT1Q99640 499 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 USB1Q9BQ65 265 aaKnown RBP14.71□□□□□ -0.05
COL2A1-202ENST00000380518 OR52A5Q9H2C5 316 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 HRASLSQ9HDD0 168 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 SLC39A9Q9NUM3 307 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 ACOXLQ9NUZ1 547 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 B3GAT1Q9P2W7 334 aa14.71□□□□□ -0.05
COL2A1-202ENST00000380518 BOLA1Q9Y3E2 137 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms