RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 JAGN1Q8N5M9 183 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 LRRC75AQ8NAA5 344 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 APCDD1LQ8NCL9 501 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 FAM71CQ8NEG0 241 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 KIAA1143Q96AT1 154 aaPredicted RBP10.59□□□□□ -0.71
PDE6C-201ENST00000371447 JAM3Q9BX67 310 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 SLC19A3Q9BZV2 496 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 ING3Q9NXR8 418 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 PPP4R1LQ9P1A2 415 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 IGKV1D-43A0A0B4J1Z2 117 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 PRSS37A4D1T9 235 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 LMX1BO60663 402 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 BGLAPP02818 100 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 TCRBP04435 133 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 CXCL3P19876 107 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 KLK2P20151 261 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 ALOX5APP20292 161 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 CDK2P24941 298 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 DCTDP32321 178 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 SLC6A8P48029 635 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 EFNB2P52799 333 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 STARD6P59095 220 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 RPL27P61353 136 aaKnown RBP10.58□□□□□ -0.72
PDE6C-201ENST00000371447 OC90Q02509 493 aaPredicted RBP10.58□□□□□ -0.72
PDE6C-201ENST00000371447 GUCA2AQ02747 115 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 SLC25A25Q6KCM7 469 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 ANKRD37Q7Z713 158 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 DVL3Q92997 716 aaPredicted RBP10.58□□□□□ -0.72
PDE6C-201ENST00000371447 MR1Q95460 341 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 TRIM63Q969Q1 353 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 CITED4Q96RK1 184 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 PTDSS2Q9BVG9 487 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 ADAM19Q9H013 955 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 UCK1Q9HA47 277 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 OR5V1Q9UGF6 321 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 IGHV5-10-1A0A0J9YXX1 117 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 A8MVM7 634 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 FABP7O15540 132 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 ZNF823P16415 610 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 ZNF28P17035 718 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 CDAP32320 146 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 GNALP38405 381 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 PRKXP51817 358 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 EPHA4P54764 986 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 DCDP81605 110 aaKnown RBP10.58□□□□□ -0.72
PDE6C-201ENST00000371447 RSPO4Q2I0M5 234 aaPredicted RBP10.58□□□□□ -0.72
PDE6C-201ENST00000371447 Q499Y3 187 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 TMEM71Q6P5X7 295 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 PPP1R3BQ86XI6 285 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 PRSS35Q8N3Z0 413 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 ASCC1Q8N9N2 400 aaKnown RBP10.58□□□□□ -0.72
PDE6C-201ENST00000371447 FAM46BQ96A09 425 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 MVB12AQ96EY5 273 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 SPACA5Q96QH8 159 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 OR5B2Q96R09 309 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 DPAGT1Q9H3H5 408 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 LOC101059948A0A1B0GTJ6 334 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 A0A1W2PPL8 197 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 DHFRP00374 187 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 APEHP13798 732 aaKnown RBP10.58□□□□□ -0.72
PDE6C-201ENST00000371447 SSTR2P30874 369 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 CLDN20P56880 219 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 UBE2MP61081 183 aaKnown RBP10.58□□□□□ -0.72
PDE6C-201ENST00000371447 SLC36A2Q495M3 483 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 TCEAL6Q6IPX3 200 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 TRILQ7L0X0 811 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 DCXRQ7Z4W1 244 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.58□□□□□ -0.72
PDE6C-201ENST00000371447 DNASE2BQ8WZ79 361 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 AKAP1Q92667 903 aaKnown RBP eCLIP10.58□□□□□ -0.72
PDE6C-201ENST00000371447 TCEAL3Q969E4 200 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 DEFB126Q9BYW3 111 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 FBXL2Q9UKC9 423 aa10.58□□□□□ -0.72
PDE6C-201ENST00000371447 EML5Q05BV3 1969 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 CACNA1HO95180 2353 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 RLN1P04808 185 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 YES1P07947 543 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 PNLIPRP2P54317 469 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 BIDP55957 195 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 RRAS2P62070 204 aaPredicted RBP10.57□□□□□ -0.72
PDE6C-201ENST00000371447 EFR3AQ14156 821 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 SLC35D3Q5M8T2 416 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 ZNF627Q7L945 461 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 NUP54Q7Z3B4 507 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 S100A16Q96FQ6 103 aaKnown RBP10.57□□□□□ -0.72
PDE6C-201ENST00000371447 MAP6Q96JE9 813 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 NECAB3Q96P71 396 aaPredicted RBP10.57□□□□□ -0.72
PDE6C-201ENST00000371447 MICU1Q9BPX6 476 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 SPATA2Q9UM82 520 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 LOC400499M0QZD8 3231 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 TRAV18A0A075B6X5 111 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 IGHV3-15A0A0B4J1V0 119 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 MEN1O00255 615 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 UBL3O95164 117 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 SLC6A1P30531 599 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 VEGFCP49767 419 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 GALK2Q01415 458 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 NR0B2Q15466 257 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 EEF1A1P5Q5VTE0 462 aa10.57□□□□□ -0.72
PDE6C-201ENST00000371447 GRINAQ7Z429 371 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms