RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 DNASE2BQ8WZ79 361 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 RYDENQ9NUL5 291 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ACOXLQ9NUZ1 547 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 NUDT15Q9NV35 164 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 HAO2Q9NYQ3 351 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 MLXQ9UH92 298 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 CCDC88CQ9P219 2028 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 UNC13CQ8NB66 2214 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 FXYD6-FXYD2A0A087WZ82 144 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 TCRBV16S1A1N1A0A5B0 115 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ZC3H12DA2A288 527 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 B8ZZF3 427 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 KLRC4-KLRK1H3BQV0 150 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 MRPL33O75394 65 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 AKR7A3O95154 331 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 WDPCPO95876 746 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 LIMS3P0CW19 117 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 LIMS4P0CW20 117 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 TRAPPC2P0DI81 140 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 TRAPPC2BP0DI82 140 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 CALCBP10092 127 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ACHEP22303 614 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 HTR2AP28223 471 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC37A1P57057 533 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 UBE2NP61088 152 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 GRB2P62993 217 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 TGFBR3Q03167 851 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 MEF2DQ14814 521 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 P2RY14Q15391 338 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 CNN3Q15417 329 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ESCO2Q56NI9 601 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 SFRP4Q6FHJ7 346 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF770Q6IQ21 691 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 SIRT6Q8N6T7 355 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 GJC3Q8NFK1 279 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 OR8D4Q8NGM9 314 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 OR2T35Q8NGX2 323 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 OR6F1Q8NGZ6 308 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 COQ8AQ8NI60 647 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 LGALS14Q8TCE9 139 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 FOXN4Q96NZ1 517 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 MENTQ9BUN1 341 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 BCL2L14Q9BZR8 327 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 FXYD6Q9H0Q3 95 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 MOB1AQ9H8S9 216 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 COA3Q9Y2R0 106 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 CACNA1CQ13936 2221 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 TRAV1-2A0A0B4J238 106 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 PIGBOS1A0A0B4J2F0 54 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 A0A1W2PR77 199 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 C2orf72A6NCS6 295 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 OR14I1A6ND48 311 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 WRBO00258 174 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 CDC42EP2O14613 210 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 RAB3DO95716 219 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 C1QCP02747 245 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 AMY2AP04746 511 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 TMEM225BP0DP42 221 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 AMY2BP19961 511 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 HTR2CP28335 458 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 BDKRB2P30411 391 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 THBS2P35442 1172 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 MPLP40238 635 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 LIMS1P48059 325 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ASAH1Q13510 395 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 RSU1Q15404 277 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 TOMM34Q15785 309 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 PRSS53Q2L4Q9 553 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF362Q5T0B9 420 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ALKBH2Q6NS38 261 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 C3P1Q6ZMU1 363 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 LANCL3Q6ZV70 420 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 PGAP1Q75T13 922 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 BTN2A1Q7KYR7 527 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 DCXRQ7Z4W1 244 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 WDR5BQ86VZ2 330 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 C17orf47Q8NEP4 570 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 OR6M1Q8NGM8 313 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 KCNE4Q8WWG9 221 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 OXGR1Q96P68 337 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 TAAR9Q96RI9 348 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 PDCD1LG2Q9BQ51 273 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 HCAR1Q9BXC0 346 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 OR11A1Q9GZK7 315 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ARRDC1-AS1Q9H2J1 176 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 TMEM9BQ9NQ34 198 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 STEAP1Q9UHE8 339 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 OR52A1Q9UKL2 312 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 ICAM5Q9UMF0 924 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 EMC9Q9Y3B6 208 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 BRWD1Q9NSI6 2320 aa4.83□□□□□ -1.64
SMNDC1-202ENST00000369603 A0A0X1KG70 313 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 KANTRA0A1W2PQU2 76 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 GGT3PA6NGU5 568 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF736B4DX44 427 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 SSX4O60224 188 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 PRKNO60260 465 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 CT45A8P0DMV1 189 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 CT45A9P0DMV2 189 aa4.82□□□□□ -1.64
SMNDC1-202ENST00000369603 PRKACAP17612 351 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms