RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 BOD1Q96IK1 185 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 C1QTNF6Q9BXI9 259 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 HDAC8Q9BY41 377 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 PARP12Q9H0J9 701 aaKnown RBP16.91■□□□□ 0.3
SHANK1-202ENST00000359082 GPR55Q9Y2T6 319 aaPredicted RBP16.91■□□□□ 0.3
SHANK1-202ENST00000359082 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.91■□□□□ 0.3
SHANK1-202ENST00000359082 OR52H1Q8NGJ2 320 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 NPAP1Q9NZP6 1156 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 NWD2Q9ULI1 1742 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 ZC3H12DA2A288 527 aaKnown RBP16.91■□□□□ 0.3
SHANK1-202ENST00000359082 EIF1BO60739 113 aaKnown RBP16.91■□□□□ 0.3
SHANK1-202ENST00000359082 NDUFB7P17568 137 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 APEX1P27695 318 aaKnown RBP16.91■□□□□ 0.3
SHANK1-202ENST00000359082 GRB2P62993 217 aaKnown RBP16.91■□□□□ 0.3
SHANK1-202ENST00000359082 FCN2Q15485 313 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 HENMT1Q5T8I9 393 aaKnown RBP16.91■□□□□ 0.3
SHANK1-202ENST00000359082 ZADH2Q8N4Q0 377 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 TMEM104Q8NE00 496 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 THOC3Q96J01 351 aaKnown RBP16.91■□□□□ 0.3
SHANK1-202ENST00000359082 C11orf54Q9H0W9 315 aaPredicted RBP16.91■□□□□ 0.3
SHANK1-202ENST00000359082 C4BP0C0L5 1744 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 KDM3BQ7LBC6 1761 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 F6UZH7 168 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 KLRC4-KLRK1H3BQV0 150 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 HLA-HP01893 362 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 PAX6P26367 422 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 LIM2P55344 173 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 DBX2Q6ZNG2 339 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 ZNF740Q8NDX6 193 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 FAM71CQ8NEG0 241 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 GAB2Q9UQC2 676 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 EMP3P54852 163 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 P2RX3P56373 397 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 NHSL2Q5HYW2 709 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 CLEC2DQ9UHP7 191 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 OR10J5Q8NHC4 309 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 EDAQ92838 391 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 K7EQM0 130 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 FLI1Q01543 452 aaPredicted RBP16.9■□□□□ 0.3
SHANK1-202ENST00000359082 ZNF266Q14584 549 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 H2BFWTQ7Z2G1 175 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 YIPF5Q969M3 257 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 NRSN2Q9GZP1 204 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 ISYNA1Q9NPH2 558 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 OBP2AQ9NY56 170 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 SCN11AQ9UI33 1791 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 RGS11O94810 467 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 TMEM182Q6ZP80 229 aaPredicted RBP16.9■□□□□ 0.3
SHANK1-202ENST00000359082 CHST8Q9H2A9 424 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 WASH6PQ9NQA3 447 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 PTTG3PQ9NZH4 202 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 MYH10P35580 1976 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 UBL3O95164 117 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 CTRB1P17538 263 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 MAP2K6P52564 334 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 HCCSP53701 268 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 GPR85P60893 370 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 AVPI1Q5T686 147 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 KDM4DQ6B0I6 523 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 CTRB2Q6GPI1 263 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 SLC48A1Q6P1K1 146 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 ZNF583Q96ND8 569 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 KRBOX1C9JBD0 128 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 THBS1P07996 1170 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 SLC35E2P0CK97 266 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 CREB3L2Q70SY1 520 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 ANGPTL5Q86XS5 388 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 AHDC1Q5TGY3 1603 aaPredicted RBP16.9■□□□□ 0.3
SHANK1-202ENST00000359082 ALOX12BO75342 701 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 TPOP07202 933 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 C1orf140Q5VVS0 124 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 TRNP1Q6NT89 227 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 RETREG3Q86VR2 466 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 LILRA3Q8N6C8 439 aaPredicted RBP16.9■□□□□ 0.3
SHANK1-202ENST00000359082 OR13H1Q8NG92 308 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 OR51A4Q8NGJ6 313 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 OR51A2Q8NGJ7 313 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 NEURL3Q96EH8 262 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 PKMYT1Q99640 499 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 ADAMTS5Q9UNA0 930 aa16.9■□□□□ 0.3
SHANK1-202ENST00000359082 MRPS2Q9Y399 296 aaKnown RBP16.9■□□□□ 0.3
SHANK1-202ENST00000359082 SLC5A10A0PJK1 596 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 XRCC3O43542 346 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 RAC1P63000 192 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 TEKQ02763 1124 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 FAM58AQ8N1B3 248 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 BARHL1Q9BZE3 327 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 FGF21Q9NSA1 209 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 PPP1R3CQ9UQK1 317 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 KIR2DL3P43628 341 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 KCNAB1Q14722 419 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 OR8G1Q15617 311 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 SEMA6DQ8NFY4 1073 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 SLC35A4Q96G79 324 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 TAS2R5Q9NYW4 299 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 MUTYHQ9UIF7 546 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 URGCP-MRPS24S4R325 110 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 SLC31A2O15432 143 aa16.89■□□□□ 0.29
SHANK1-202ENST00000359082 CSF3P09919 207 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms