RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 IGLV1-36A0A0B4J1U3 117 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 PRR23D1E9PI22 279 aaPredicted RBP22.35■■□□□ 1.17
SSBP3-202ENST00000357475 SEC14L2O76054 403 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 ITGA5P08648 1049 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 PRR23D2P0DMB1 279 aaPredicted RBP22.35■■□□□ 1.17
SSBP3-202ENST00000357475 CHRNB4P30926 498 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 HSPA13P48723 471 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 ZNF133P52736 654 aaPredicted RBP22.35■■□□□ 1.17
SSBP3-202ENST00000357475 ISL1P61371 349 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 IL5RAQ01344 420 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 CEACAM16Q2WEN9 425 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 THEM4Q5T1C6 240 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 LYPD4Q6UWN0 246 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 B3GLCTQ6Y288 498 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 GABRG1Q8N1C3 465 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 RBP7Q96R05 134 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 OR51V1Q9H2C8 321 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 DNAJC27Q9NZQ0 273 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 B9D1Q9UPM9 204 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 PCDHGB5Q9Y5G0 923 aa22.35■■□□□ 1.17
SSBP3-202ENST00000357475 FAM90A27PA6NNH2 459 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 A8MXE2 369 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 AHCYL1O43865 530 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 SPI1P17947 270 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 IGHV1-2P23083 117 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 CDAP32320 146 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 TSC22D1Q15714 1073 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 OR8J1Q8NGP2 316 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 CNIH3Q8TBE1 160 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 APOL4Q9BPW4 351 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 RBM24Q9BX46 236 aaKnown RBP22.34■■□□□ 1.17
SSBP3-202ENST00000357475 PIGMQ9H3S5 423 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 COQ3Q9NZJ6 369 aa22.34■■□□□ 1.17
SSBP3-202ENST00000357475 COA3Q9Y2R0 106 aaPredicted RBP22.34■■□□□ 1.17
SSBP3-202ENST00000357475 ZNF587BE7ETH6 402 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 DHHO43323 396 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 RNF224P0DH78 156 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 SLC2A5P22732 501 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 SLC25A1P53007 311 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 MAD2L1BPQ15013 274 aaPredicted RBP22.33■■□□□ 1.17
SSBP3-202ENST00000357475 C10orf128Q5T292 105 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 AADACL4Q5VUY2 407 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 Q6ZT83 130 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 ZBTB46Q86UZ6 589 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 DEPDC4Q8N2C3 294 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 RHOXF1Q8NHV9 184 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 RAB26Q9ULW5 256 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 MYO18BQ8IUG5 2567 aa22.33■■□□□ 1.17
SSBP3-202ENST00000357475 NKX2-6A6NCS4 301 aa22.32■■□□□ 1.16
SSBP3-202ENST00000357475 OR6C65A6NJZ3 312 aa22.32■■□□□ 1.16
SSBP3-202ENST00000357475 RPL36A-HNRNPH2H7BZ11 118 aa22.32■■□□□ 1.16
SSBP3-202ENST00000357475 MSTNO14793 375 aa22.32■■□□□ 1.16
SSBP3-202ENST00000357475 MPZL1O95297 269 aa22.32■■□□□ 1.16
SSBP3-202ENST00000357475 SCG5P05408 212 aa22.32■■□□□ 1.16
SSBP3-202ENST00000357475 SNRPGP62308 76 aaKnown RBP22.32■■□□□ 1.16
SSBP3-202ENST00000357475 SRSF1Q07955 248 aaKnown RBP eCLIP22.32■■□□□ 1.16
SSBP3-202ENST00000357475 IL18R1Q13478 541 aa22.32■■□□□ 1.16
SSBP3-202ENST00000357475 MRGPRGQ86SM5 289 aa22.32■■□□□ 1.16
SSBP3-202ENST00000357475 FAM26EQ8N5C1 309 aa22.32■■□□□ 1.16
SSBP3-202ENST00000357475 ITLN2Q8WWU7 325 aaPredicted RBP22.32■■□□□ 1.16
SSBP3-202ENST00000357475 ANKRD60Q9BZ19 345 aa22.32■■□□□ 1.16
SSBP3-202ENST00000357475 B3GAT2Q9NPZ5 323 aa22.32■■□□□ 1.16
SSBP3-202ENST00000357475 ENTPD6O75354 484 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 WBP4O75554 376 aaKnown RBP22.31■■□□□ 1.16
SSBP3-202ENST00000357475 LYZL6O75951 148 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 PAICSP22234 425 aaKnown RBP22.31■■□□□ 1.16
SSBP3-202ENST00000357475 SMN1Q16637 294 aaKnown RBP22.31■■□□□ 1.16
SSBP3-202ENST00000357475 KLHL12Q53G59 568 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 LINC01590Q5TEZ4 76 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 LAIR2Q6ISS4 152 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 CXorf67Q86X51 503 aaPredicted RBP22.31■■□□□ 1.16
SSBP3-202ENST00000357475 C8orf59Q8N0T1 100 aaPredicted RBP22.31■■□□□ 1.16
SSBP3-202ENST00000357475 PROKR2Q8NFJ6 384 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 TRUB1Q8WWH5 349 aaKnown RBP22.31■■□□□ 1.16
SSBP3-202ENST00000357475 ZNF582Q96NG8 517 aaPredicted RBP22.31■■□□□ 1.16
SSBP3-202ENST00000357475 FKBP7Q9Y680 259 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 CCDC182A6NF36 153 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 KHDRBS3O75525 346 aaKnown RBP22.31■■□□□ 1.16
SSBP3-202ENST00000357475 ARF1P84077 181 aaKnown RBP22.31■■□□□ 1.16
SSBP3-202ENST00000357475 APOFQ13790 326 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 MTFR2Q6P444 385 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 OR2T4Q8NH00 348 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 LILRB4Q8NHJ6 448 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 FNDC8Q8TC99 324 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 CNBD2Q96M20 576 aa22.31■■□□□ 1.16
SSBP3-202ENST00000357475 A0A1W2PPL8 197 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 COX5AP20674 150 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 MYF6P23409 242 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 MPGP29372 298 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 CRABP1P29762 137 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 CENPAP49450 140 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 FAM27E3Q08E93 113 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 NXNL2Q5VZ03 156 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 BEND4Q6ZU67 534 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 SETD9Q8NE22 299 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 ASB5Q8WWX0 329 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 KISS1RQ969F8 398 aaPredicted RBP22.3■■□□□ 1.16
SSBP3-202ENST00000357475 RACGAP1Q9H0H5 632 aa22.3■■□□□ 1.16
SSBP3-202ENST00000357475 CACNA1CQ13936 2221 aa22.29■■□□□ 1.16
SSBP3-202ENST00000357475 TVP23AA6NH52 213 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms