RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 A0A1W2PQ09 198 aa13.58□□□□□ -0.24
COL17A1-201ENST00000353479 ASPDHA6ND91 283 aa13.58□□□□□ -0.24
COL17A1-201ENST00000353479 PATE3B3GLJ2 98 aa13.58□□□□□ -0.24
COL17A1-201ENST00000353479 TMEM179BQ7Z7N9 219 aa13.58□□□□□ -0.24
COL17A1-201ENST00000353479 OR6F1Q8NGZ6 308 aa13.58□□□□□ -0.24
COL17A1-201ENST00000353479 MSL3P1P0C860 447 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 MTNR1BP49286 362 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 PWWP2BQ6NUJ5 590 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 PLPP7Q8NBV4 271 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 DCLRE1CQ96SD1 692 aaKnown RBP13.57□□□□□ -0.24
COL17A1-201ENST00000353479 DECR2Q9NUI1 292 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 FKBP14Q9NWM8 211 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 RDH8Q9NYR8 311 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 GLSO94925 669 aaPredicted RBP13.57□□□□□ -0.24
COL17A1-201ENST00000353479 GIFP27352 417 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 AGTR1P30556 359 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 ZNF93P35789 620 aaPredicted RBP13.57□□□□□ -0.24
COL17A1-201ENST00000353479 ETV5P41161 510 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 ETV1P50549 477 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 TAS2R19P59542 299 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 OR1C1Q15619 314 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 EMC4Q5J8M3 183 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 METTL11BQ5VVY1 283 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 PRAMEF9Q5VWM5 478 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 OXGR1Q96P68 337 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 TSSK2Q96PF2 358 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 SLC19A3Q9BZV2 496 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 FBXL4Q9UKA2 621 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 RCE1Q9Y256 329 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 MCRIP1C9JLW8 97 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 TNFSF14O43557 240 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 SC5DO75845 299 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 EML2O95834 649 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 LIPAP38571 399 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 FGFBP1Q14512 234 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 IHHQ14623 411 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 DESI1Q6ICB0 168 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 ANKRD37Q7Z713 158 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 SULF2Q8IWU5 870 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 SLC22A24Q8N4F4 322 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 GPR119Q8TDV5 335 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 RAB3CQ96E17 227 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 TRAPPC2LQ9UL33 140 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 NDRG4Q9ULP0 352 aaKnown RBP13.57□□□□□ -0.24
COL17A1-201ENST00000353479 ZNF638Q14966 1978 aaKnown RBP13.57□□□□□ -0.24
COL17A1-201ENST00000353479 A0A096LPE4 126 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 A0A1W2PPZ6 126 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 ZAR1LA6NP61 321 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 M0R036 132 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 ERP29P30040 261 aaKnown RBP13.57□□□□□ -0.24
COL17A1-201ENST00000353479 LIPNQ5VXI9 398 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 STOML3Q8TAV4 291 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 ZBTB8AQ96BR9 441 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 NICN1Q9BSH3 213 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 GABARAPL3Q9BY60 117 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 AKR1D1P51857 326 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 MAP2K6P52564 334 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 TNK1Q13470 666 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 ZMAT1Q5H9K5 638 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 NAXDQ8IW45 347 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 LAX1Q8IWV1 398 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 FAM26EQ8N5C1 309 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 OR1S1Q8NH92 325 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 KCNG3Q8TAE7 436 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 ROBO4Q8WZ75 1007 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 ZNF286AQ9HBT8 521 aa13.57□□□□□ -0.24
COL17A1-201ENST00000353479 TDRD15B5MCY1 1934 aaKnown RBP13.56□□□□□ -0.24
COL17A1-201ENST00000353479 SHISA8B8ZZ34 492 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 BLVRBP30043 206 aaPredicted RBP13.56□□□□□ -0.24
COL17A1-201ENST00000353479 WNT3P56703 355 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 CTU2Q2VPK5 515 aaKnown RBP13.56□□□□□ -0.24
COL17A1-201ENST00000353479 THEM4Q5T1C6 240 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 FAIMQ9NVQ4 179 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 PAQR5Q9NXK6 330 aaPredicted RBP13.56□□□□□ -0.24
COL17A1-201ENST00000353479 A0A087WZY1 265 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 BET1O15155 118 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 NXPH2O95156 264 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 SLC34A2O95436 690 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 GALEQ14376 348 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 METAP1DQ6UB28 335 aaPredicted RBP13.56□□□□□ -0.24
COL17A1-201ENST00000353479 NANOGP1Q8N7R0 232 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 KCTD12Q96CX2 325 aaKnown RBP13.56□□□□□ -0.24
COL17A1-201ENST00000353479 PROCRQ9UNN8 238 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 SLC5A6Q9Y289 635 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 PARP14Q460N5 1801 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 ANKUB1A6NFN9 424 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 CLEC2LP0C7M8 214 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 CAV2P51636 162 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 ZNF628Q5EBL2 1059 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 GLYATL3Q5SZD4 288 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 EXD3Q8N9H8 876 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 BBS1Q8NFJ9 593 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 GLYATL2Q8WU03 294 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 SLAMF6Q96DU3 332 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 CPNE5Q9HCH3 593 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 B3GALT5Q9Y2C3 310 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 TRPM6Q9BX84 2022 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 RBBP6Q7Z6E9 1792 aaKnown RBP13.56□□□□□ -0.24
COL17A1-201ENST00000353479 LPLP06858 475 aa13.56□□□□□ -0.24
COL17A1-201ENST00000353479 CDK4P11802 303 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms