RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ZNF584Q8IVC4 421 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 OR2L13Q8N349 312 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 OR10H5Q8NGA6 315 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 OR6N2Q8NGY6 317 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 OR5K2Q8NHB8 316 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ZCCHC10Q8TBK6 192 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 MAFIPQ8WZ33 124 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 FAM3DQ96BQ1 224 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 NUS1Q96E22 293 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 MEGF10Q96KG7 1140 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 PIGQQ9BRB3 760 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 PRO3102Q9H379 93 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 RNF186Q9NXI6 227 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 HAO2Q9NYQ3 351 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 IL36AQ9UHA7 158 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 MSRAQ9UJ68 235 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ADAM29Q9UKF5 820 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 A0A1W2PRU2 124 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 MCIDASD6RGH6 385 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ST8SIA5O15466 376 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 YIF1AO95070 293 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 OLFM2O95897 454 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 WNT11O96014 354 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 HLA-DQA2P01906 255 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 SLC25A4P12235 298 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 LAG3P18627 525 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 MAOAP21397 527 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 PSMB6P28072 239 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 MAP3K8P41279 467 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 DIO1P49895 249 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ALKBH1Q13686 389 aaKnown RBP6.95□□□□□ -1.3
BRCA1-201ENST00000352993 SLC48A1Q6P1K1 146 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ANKRD16Q6P6B7 361 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 TTLL10Q6ZVT0 673 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 TMPRSS11FQ6ZWK6 438 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ABHD13Q7L211 337 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 OR51A4Q8NGJ6 313 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 SECTM1Q8WVN6 248 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ASB13Q8WXK3 278 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ZDHHC12Q96GR4 267 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 TMEM41AQ96HV5 264 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 SDF2Q99470 211 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 CMKLR1Q99788 373 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 EDEM2Q9BV94 578 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 LMAN2LQ9H0V9 348 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 TMPRSS5Q9H3S3 457 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ABT1Q9ULW3 272 aaKnown RBP6.95□□□□□ -1.3
BRCA1-201ENST00000352993 A0A0C4DFX4 3053 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 DCDC2BA2VCK2 349 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF729A6NN14 1252 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 H7C1Q1 480 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 CLEC3AO75596 197 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 CD8AP01732 235 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 MT-ND4LP03901 98 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ITGB2P05107 769 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 DBIP07108 87 aaKnown RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 RHOP08100 348 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ITGA3P26006 1051 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 SERPINF1P36955 418 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 GPX4P36969 197 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 GLP1RP43220 463 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 NDUFA6P56556 154 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 TRA2BP62995 288 aaKnown RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 EBPQ15125 230 aaKnown RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 SSX2Q16385 188 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 PDZD11Q5EBL8 140 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 SLC8B1Q6J4K2 584 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 LPCAT3Q6P1A2 487 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 Q6ZNB5 142 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF547Q8IVP9 402 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 JAGN1Q8N5M9 183 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF383Q8NA42 475 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF417Q8TAU3 575 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ZPLD1Q8TCW7 415 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 RAB3CQ96E17 227 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 DNAJA3Q96EY1 480 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 NECAB3Q96P71 396 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ALG12Q9BV10 488 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 GGACTQ9BVM4 153 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 PCBD2Q9H0N5 130 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 LAMP5Q9UJQ1 280 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 C17orf113A0A1B0GUU1 675 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 A0A1B0GWA3 101 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 GRXCR1A8MXD5 290 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 LRP3O75074 770 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 LAP3P28838 519 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 BCL6P41182 706 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 RPS10P46783 165 aaKnown RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ID4P47928 161 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 RAB5CP51148 216 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 CEBPGP53567 150 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF124Q15973 351 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 IL34Q6ZMJ4 242 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF619Q8N2I2 560 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 FRMD1Q8N878 549 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 CLEC1AQ8NC01 280 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 DMBX1Q8NFW5 382 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 GPR148Q8TDV2 347 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ST7LQ8TDW4 575 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 SSX3Q99909 188 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms