RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CGAP01215 116 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 SCG5P05408 212 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 CDH11P55287 796 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 TEKQ02763 1124 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 THEM4Q5T1C6 240 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 RIPPLY2Q5TAB7 128 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 TFAP2EQ6VUC0 442 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 MEPCEQ7L2J0 689 aaKnown RBP16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 ZNF100Q8IYN0 542 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 BPIFB6Q8NFQ5 453 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 OR6K3Q8NGY3 331 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 SGCDQ92629 289 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 HTRA1Q92743 480 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 ZMYND19Q96E35 227 aaPredicted RBP16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 VKORC1Q9BQB6 163 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 LINC00470Q9BZP3 86 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 COA3Q9Y2R0 106 aaPredicted RBP16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 UGT2A1Q9Y4X1 527 aa16.77■□□□□ 0.27
CHMP4A-201ENST00000347519 APOL3O95236 402 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 MPZL1O95297 269 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 PLA2G2AP14555 144 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 GSTT1P30711 240 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 HTR1FP30939 366 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 ZNF91Q05481 1191 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 EIF2S3LQ2VIR3 472 aaKnown RBP16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 MEDAGQ5VYS4 303 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 ZNF786Q8N393 782 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 GPR137CQ8N3F9 429 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 ZNF511Q8NB15 262 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 GALNT11Q8NCW6 608 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 PROKR2Q8NFJ6 384 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 OR2T4Q8NH00 348 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 TEAD3Q99594 435 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 ULBP2Q9BZM5 246 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 GPR35Q9HC97 309 aa16.76■□□□□ 0.27
CHMP4A-201ENST00000347519 MYO7BQ6PIF6 2116 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 NBASA2RRP1 2371 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 TVP23AA6NH52 213 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 SLC1A7O00341 560 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 CCL21O00585 134 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 DHHO43323 396 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 KHDRBS3O75525 346 aaKnown RBP16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 GLCEO94923 617 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 CRHP06850 196 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 ADRA2AP08913 450 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 DBTP11182 482 aaKnown RBP16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 CTSSP25774 331 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 CDAP32320 146 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 CASP6P55212 293 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 RPS7P62081 194 aaKnown RBP16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 C10orf128Q5T292 105 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 LIX1LQ8IVB5 337 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 GID4Q8IVV7 300 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 SMAP2Q8WU79 429 aaPredicted RBP16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 Q96MT0 163 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 ZFP3Q96NJ6 502 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 RACGAP1Q9H0H5 632 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 OPN3Q9H1Y3 402 aaPredicted RBP16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 CRLF2Q9HC73 371 aa16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 PAK1IP1Q9NWT1 392 aaPredicted RBP16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 H2AFY2Q9P0M6 372 aaPredicted RBP16.75■□□□□ 0.27
CHMP4A-201ENST00000347519 SH3D21A4FU49 640 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 FAM20BO75063 409 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 GAAP10253 952 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 PSKH1P11801 424 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 CRABP1P29762 137 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 SLC15A1P46059 708 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 CENPAP49450 140 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 ROR2Q01974 943 aaKnown RBP16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 SHFQ7M4L6 423 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 ZNF610Q8N9Z0 462 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 OR6K6Q8NGW6 343 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 GGHQ92820 318 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 RNFT2Q96EX2 444 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 RBM24Q9BX46 236 aaKnown RBP16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 PLSCR4Q9NRQ2 329 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 PLCXD1Q9NUJ7 323 aa16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 MRPL22Q9NWU5 206 aaKnown RBP16.74■□□□□ 0.27
CHMP4A-201ENST00000347519 ESPL1Q14674 2120 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 SEC14L2O76054 403 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 TFP02787 698 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 MRPL3P09001 348 aaKnown RBP16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 PIGFQ07326 219 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 FAPQ12884 760 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 MEP1BQ16820 701 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 CEACAM16Q2WEN9 425 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 SLC35D3Q5M8T2 416 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 C9orf135Q5VTT2 229 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 FBXW9Q5XUX1 488 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 TMEM211Q6ICI0 200 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 DNM1P34Q6PK57 102 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 FJX1Q86VR8 437 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 UBE2J2Q8N2K1 259 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 POMGNT2Q8NAT1 580 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 FNDC8Q8TC99 324 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 LGALS12Q96DT0 336 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 SFXN3Q9BWM7 321 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 UPB1Q9UBR1 384 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 WARS2Q9UGM6 360 aaKnown RBP16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 PSORS1C1Q9UIG5 152 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms