RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 ACACAQ13085 2346 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 BCL9LQ86UU0 1499 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TRAV27A0A087WT01 109 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 KIR2DS1A0A191URI9 304 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SULT2B1O00204 365 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 S1PR4O95977 384 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF28P17035 718 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF93P35789 620 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 KIR2DS4P43632 304 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 P2RX3P56373 397 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 UBE2IP63279 158 aaKnown RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 KIR2DS1Q14954 304 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ZFP62Q8NB50 900 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 KREMEN2Q8NCW0 462 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 OR11L1Q8NGX0 322 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ABHD4Q8TB40 342 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TMED6Q8WW62 240 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 F2RL3Q96RI0 385 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 VN1R3Q9BXE9 311 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 NOX4Q9NPH5 578 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CA14Q9ULX7 337 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 YIPF1Q9Y548 306 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 C4AP0C0L4 1744 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 C4BP0C0L5 1744 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 FAM171A2A8MVW0 826 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ARNTLO00327 626 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 GPR171O14626 319 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SPINT2O43291 252 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 DUSP11O75319 330 aaKnown RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 OR51A4Q8NGJ6 313 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CCDC187A0A096LP49 1063 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TMEM221A6NGB7 291 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 FOXE1O00358 373 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CTXN2P0C2S0 81 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CALCBP10092 127 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 VIPR2P41587 438 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 PKIAP61925 76 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SMOQ99835 787 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TXLNGYQ9BZA5 131 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 DBHP09172 617 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 QDPRP09417 244 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SULT1A3P0DMM9 295 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SULT1A4P0DMN0 295 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 AREGP15514 252 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 NQO2P16083 231 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 COX5AP20674 150 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SLC10A2Q12908 348 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 UBE3DQ7Z6J8 389 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 VRK3Q8IV63 474 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 OR52N1Q8NH53 320 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 FUBP1Q96AE4 644 aaKnown RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 PCYT2Q99447 389 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 OBP2BQ9NPH6 170 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 DOCK3Q8IZD9 2030 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 PLXNB1O43157 2135 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SCO1O75880 301 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 EXOSC2Q13868 293 aaKnown RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ETFDHQ16134 617 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 DYNC2LI1Q8TCX1 351 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 GHSRQ92847 366 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 MAP6Q96JE9 813 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 HRASLS5Q96KN8 279 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 MS4A10Q96PG2 267 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 TMEM127O75204 238 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 OR7C1O76099 320 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CPNE6O95741 557 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 GABRB1P18505 474 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 GPX3P22352 226 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 GP2P55259 537 aaKnown RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ZP2Q05996 745 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 RTP4Q96DX8 246 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SERINC2Q96SA4 455 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 PLEKHF2Q9H8W4 249 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 DNMT3BQ9UBC3 853 aaKnown RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 GABRQQ9UN88 632 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 MED1Q15648 1581 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF816-ZNF321PA0A0X1KG74 233 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF320A2RRD8 509 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 WNT7AO00755 349 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CSO75390 466 aaKnown RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CD99P14209 185 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 MEOX1P50221 254 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CCL23P55773 120 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 OR5I1Q13606 314 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 PMS2P11Q13670 270 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 FAM180BQ6P0A1 224 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF321PQ8N8H1 164 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 OR51A2Q8NGJ7 313 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 OR10D4PQ8NGN7 298 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 LHX4Q969G2 390 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF845Q96IR2 970 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF778Q96MU6 729 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 DEFB118Q96PH6 123 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 C11orf84Q9BUA3 381 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 CXXC1Q9P0U4 656 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 PAPLNO95428 1278 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF17P17021 662 aa5.72□□□□□ -1.49
CSMD1-201ENST00000335551 BLVRBP30043 206 aaPredicted RBP5.72□□□□□ -1.49
CSMD1-201ENST00000335551 MAP2K6P52564 334 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms