RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 OR2T1O43869 369 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 DHFRP00374 187 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 ANXA2P07355 339 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 GZMKP49863 264 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 DCDP81605 110 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 PLA2G7Q13093 441 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 SNTB2Q13425 540 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 SLC17A1Q14916 467 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 OR7A5Q15622 319 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 FAM205BPQ63HN1 556 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 WDFY1Q8IWB7 410 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 SAP25Q8TEE9 199 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 TMEM234Q8WY98 164 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 NXPE2Q96DL1 559 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 SCMH1Q96GD3 660 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 DUSP23Q9BVJ7 150 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 RARRES3Q9UL19 164 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 RCE1Q9Y256 329 aa13.37□□□□□ -0.27
CLCNKA-201ENST00000331433 ANKUB1A6NFN9 424 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 PNPP00491 289 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 TMIGD3P0DMS9 266 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 EMP2P54851 167 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 RASGEF1BQ0VAM2 473 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 MAB21L1Q13394 359 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 MISPQ8IVT2 679 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 DND1Q8IYX4 353 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 TSEN15Q8WW01 171 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 HGDQ93099 445 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 CCDC74BQ96LY2 380 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 GHITMQ9H3K2 345 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 MRPL39Q9NYK5 338 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 KLK11Q9UBX7 282 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 FOXJ3Q9UPW0 622 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 COA3Q9Y2R0 106 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 MED12Q93074 2177 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 WDFY4Q6ZS81 3184 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 MS4A18H0YCH9 400 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 GDF9O60383 454 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 C1QBP02746 253 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 CDK2P24941 298 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 ERP29P30040 261 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 PTH2RP49190 550 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 FMODQ06828 376 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 PUDPQ08623 228 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 C17orf67Q0P5P2 114 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 FOXF1Q12946 379 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 MS4A18Q3C1V0 323 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 TMEM255AQ5JRV8 349 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 TMEM69Q5SWH9 247 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 OR7E24Q6IFN5 339 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 SLC18B1Q6NT16 456 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 ZNF679Q8IYX0 411 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 NUBPLQ8TB37 319 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 PIGKQ92643 395 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 PHF21AQ96BD5 680 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 S100A16Q96FQ6 103 aaKnown RBP13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 MED28Q9H204 178 aa13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 AKIRIN1Q9H9L7 192 aaPredicted RBP13.36□□□□□ -0.27
CLCNKA-201ENST00000331433 A0A1B0GTQ1 180 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 C7orf66A4D0T2 115 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 FAM47E-STBD1D6RA91 191 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 H3BML4 177 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 GMDSO60547 372 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 CALCBP10092 127 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 CCKBRP32239 447 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 MFGE8Q08431 387 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 EIF2B1Q14232 305 aaKnown RBP13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 HLA-BQ31612 363 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 SFRP4Q6FHJ7 346 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 Q7L0L9 218 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 GLB1L2Q8IW92 636 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 NKX3-1Q99801 234 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 BEX1Q9HBH7 125 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 KLRF1Q9NZS2 232 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 GPR171O14626 319 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 ZNF432O94892 652 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 IGHMP01871 453 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 SYPP08247 313 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 FBXO45P0C2W1 286 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 IFNGR1P15260 489 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 PNLIPP16233 465 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 ART1P52961 327 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 DYRK1AQ13627 763 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 SLC22A10Q63ZE4 541 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 ZNF385CQ66K41 422 aaPredicted RBP13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 KRT77Q7Z794 578 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 BEST4Q8NFU0 473 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 OR2I1PQ8NGU4 316 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 ZFAND1Q8TCF1 268 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 ASB17Q8WXJ9 295 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 ST8SIA1Q92185 356 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 MIB2Q96AX9 1013 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 HAVCR1Q96D42 359 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 SPSB2Q99619 263 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 ABHD6Q9BV23 337 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 MED29Q9NX70 200 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 NKIRAS2Q9NYR9 191 aa13.35□□□□□ -0.27
CLCNKA-201ENST00000331433 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.34□□□□□ -0.27
CLCNKA-201ENST00000331433 GABARAPH6UMI1 98 aa13.34□□□□□ -0.27
CLCNKA-201ENST00000331433 RAF1P04049 648 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms