RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TESK1Q15569 626 aa19.36■□□□□ 0.69
RNF40-201ENST00000324685 CCDC71Q8IV32 467 aaPredicted RBP19.36■□□□□ 0.69
RNF40-201ENST00000324685 VRK3Q8IV63 474 aa19.36■□□□□ 0.69
RNF40-201ENST00000324685 OR6K3Q8NGY3 331 aa19.36■□□□□ 0.69
RNF40-201ENST00000324685 PIGTQ969N2 578 aa19.36■□□□□ 0.69
RNF40-201ENST00000324685 SLC6A17Q9H1V8 727 aa19.36■□□□□ 0.69
RNF40-201ENST00000324685 CCDC88AQ3V6T2 1871 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 PRAMEF25A6NGN4 478 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 APOA2P02652 100 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 DOK3Q7L591 496 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 TEX19Q8NA77 164 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 HSD17B11Q8NBQ5 300 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 PLPP7Q8NBV4 271 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 OR4Q3Q8NH05 313 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 LIPHQ8WWY8 451 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 SLC25A46Q96AG3 418 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 DCLRE1CQ96SD1 692 aaKnown RBP19.35■□□□□ 0.69
RNF40-201ENST00000324685 TAF9BQ9HBM6 251 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 KPTNQ9Y664 436 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 HPNP05981 417 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 MTHFD2P13995 350 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 EDN3P14138 238 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 POU3F3P20264 500 aaPredicted RBP19.35■□□□□ 0.69
RNF40-201ENST00000324685 NPY4RP50391 375 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 H1FNTQ75WM6 255 aaPredicted RBP19.35■□□□□ 0.69
RNF40-201ENST00000324685 TMEM178AQ8NBL3 297 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 INTS12Q96CB8 462 aaKnown RBP19.35■□□□□ 0.69
RNF40-201ENST00000324685 SEC22CQ9BRL7 303 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 HEYLQ9NQ87 328 aaPredicted RBP19.35■□□□□ 0.69
RNF40-201ENST00000324685 FKBP2P26885 142 aaKnown RBP19.35■□□□□ 0.69
RNF40-201ENST00000324685 HSF5Q4G112 596 aaPredicted RBP19.35■□□□□ 0.69
RNF40-201ENST00000324685 BCDIN3DQ7Z5W3 292 aaKnown RBP19.35■□□□□ 0.69
RNF40-201ENST00000324685 ZNF511Q8NB15 262 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 OR52H1Q8NGJ2 320 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 GOT1L1Q8NHS2 421 aaPredicted RBP19.35■□□□□ 0.69
RNF40-201ENST00000324685 STT3BQ8TCJ2 826 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 ELF4Q99607 663 aaPredicted RBP19.35■□□□□ 0.69
RNF40-201ENST00000324685 BARHL1Q9BZE3 327 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 PIGMQ9H3S5 423 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 SCPEP1Q9HB40 452 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 DOK2O60496 412 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 FABP1P07148 127 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 SNTB1Q13884 538 aaKnown RBP19.35■□□□□ 0.69
RNF40-201ENST00000324685 MARCH3Q86UD3 253 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 HCFC2Q9Y5Z7 792 aa19.35■□□□□ 0.69
RNF40-201ENST00000324685 SMLR1H3BR10 107 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 TRAF3IP2O43734 574 aaPredicted RBP19.34■□□□□ 0.69
RNF40-201ENST00000324685 RPL27P61353 136 aaKnown RBP19.34■□□□□ 0.69
RNF40-201ENST00000324685 IL34Q6ZMJ4 242 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 GRINAQ7Z429 371 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 SLC25A43Q8WUT9 341 aaPredicted RBP19.34■□□□□ 0.69
RNF40-201ENST00000324685 TOX2Q96NM4 488 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 OSGIN2Q9Y236 505 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 LRRC30A6NM36 301 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 PPP1R2P9O14990 202 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 OR10J4P0C629 311 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 MMP11P24347 488 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 PTAFRP25105 342 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 TEAD1P28347 426 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 LIM2P55344 173 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 EXT1Q16394 746 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 PLK3Q9H4B4 646 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 BCO1Q9HAY6 547 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 GIPP09681 153 aaPredicted RBP19.34■□□□□ 0.69
RNF40-201ENST00000324685 PIGAP37287 484 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.34■□□□□ 0.69
RNF40-201ENST00000324685 FAM74A1Q5RGS3 127 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 SEMA6DQ8NFY4 1073 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 CLEC2DQ9UHP7 191 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 FBXL4Q9UKA2 621 aa19.34■□□□□ 0.69
RNF40-201ENST00000324685 EXO1Q9UQ84 846 aaKnown RBP19.34■□□□□ 0.69
RNF40-201ENST00000324685 KIR2DS1A0A191URI9 304 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 SELEP16581 610 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 KIR2DS4P43632 304 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 SEMA3BQ13214 749 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 KIR2DS1Q14954 304 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 DUSP6Q16828 381 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 DHRS4L2Q6PKH6 230 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 ANGPTL5Q86XS5 388 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 ADGRF3Q8IZF5 1079 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 EMG1Q92979 244 aaKnown RBP19.33■□□□□ 0.69
RNF40-201ENST00000324685 NTN4Q9HB63 628 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 SLC2A1P11166 492 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 DBPQ10586 325 aaPredicted RBP19.33■□□□□ 0.69
RNF40-201ENST00000324685 LRRC26Q2I0M4 334 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 RFLNAQ6ZTI6 216 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 C1orf87Q8N0U7 546 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 LRFN5Q96NI6 719 aa19.33■□□□□ 0.69
RNF40-201ENST00000324685 KLRC4-KLRK1H3BQV0 150 aa19.33■□□□□ 0.68
RNF40-201ENST00000324685 TAAR5O14804 337 aa19.33■□□□□ 0.68
RNF40-201ENST00000324685 F11P03951 625 aa19.33■□□□□ 0.68
RNF40-201ENST00000324685 SAXO2Q658L1 398 aa19.33■□□□□ 0.68
RNF40-201ENST00000324685 PFN4Q8NHR9 129 aa19.33■□□□□ 0.68
RNF40-201ENST00000324685 TWSG1Q9GZX9 223 aa19.33■□□□□ 0.68
RNF40-201ENST00000324685 THAP10Q9P2Z0 257 aaPredicted RBP19.33■□□□□ 0.68
RNF40-201ENST00000324685 NPPBP16860 134 aa19.33■□□□□ 0.68
RNF40-201ENST00000324685 PHLDA2Q53GA4 152 aa19.33■□□□□ 0.68
RNF40-201ENST00000324685 PCNPQ8WW12 178 aaKnown RBP19.33■□□□□ 0.68
RNF40-201ENST00000324685 HS3ST3A1Q9Y663 406 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms